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SCNpilot_expt_500_bf_scaffold_11779_16

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(6630..7232)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L4 n=1 Tax=Rhodanobacter fulvus Jip2 RepID=I4VM72_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 97.5
  • Coverage: 200.0
  • Bit_score: 379
  • Evalue 2.00e-102
  • rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 200.0
  • Bit_score: 379
  • Evalue 2.80e-102
50S ribosomal protein L4, bacterial/organelle similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 200.0
  • Bit_score: 373
  • Evalue 3.50e-101
  • rbh

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Taxonomy

Rhodanobacter fulvus → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
ATGGAACTCAATGTCATGGGTGCCAAGCCGCTCAGCGTGTCGGACGAAGTGTTCGGCGGCGAGTACAAGAAGGCCCTGGTGCACCAGGTCGTGGTTGCCTATCAGGCCGCTGGCCGCGCCGGTACCAAGGCGCAGCTGTCCCGCGGCGAAATGTCCGGCACCACCAAGAAGTTCAAGAAGCAGAAGGGCGGCGGCGCCCGCCACGGTGACTACCGTGCCCCGATCTTCGTCGGTGGTGGTGTCACGTTCGCCGCCAAGCCGCGCAGCTACGAGCAGAAGGTCAACCGCAAGGCTTATCGCGTCGCGATCCGCTCGATCTTTTCCGAGCTGGTTCGCCAGGGTCGCCTGAAGGTGGTCGAGAGCTTCGGCATCGAGACGCCGAAGACCTCCGCGATGGTCGCCAAGCTGGCCGAGCTGGACGTGTCCGGTCGCGTGTTGCTGGTGTCCGAGGATGCCTCCGAATCCGTGTTCCTGGCTGCGCGCAACATCCCCTACATCCATGTGCTGGATGTGATGGGCCTGAACCCCGTCAGCCTCGTCGGCTCCGACCACGTGGTGGTCACGGTCGATGCGGTGAAGAAGATCGAGGAGTGGCTGGCATGA
PROTEIN sequence
Length: 201
MELNVMGAKPLSVSDEVFGGEYKKALVHQVVVAYQAAGRAGTKAQLSRGEMSGTTKKFKKQKGGGARHGDYRAPIFVGGGVTFAAKPRSYEQKVNRKAYRVAIRSIFSELVRQGRLKVVESFGIETPKTSAMVAKLAELDVSGRVLLVSEDASESVFLAARNIPYIHVLDVMGLNPVSLVGSDHVVVTVDAVKKIEEWLA*