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SCNpilot_expt_500_bf_scaffold_11779_17

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(7244..7885)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L3 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VZ65_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 94.8
  • Coverage: 213.0
  • Bit_score: 410
  • Evalue 8.70e-112
  • rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 213.0
  • Bit_score: 410
  • Evalue 1.20e-111
LSU ribosomal protein L3P similarity KEGG
DB: KEGG
  • Identity: 94.8
  • Coverage: 213.0
  • Bit_score: 408
  • Evalue 1.80e-111
  • rbh

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 642
ATGAGTATCGGATTGGTTGGCCGCAAATGCGGCATGAGCCGACTCTTCACTGAAGACGGCCGCTCGATTCCGGTGACGCTGATTGAAGCGACGCCGAACCGCGTGACCCAGGTGAAGACGGACGACAACGATGGCTACAGCGCCGTCCAGGTTTCCGCAGGCAGCAAGCGTGCGAACCTGCTGACGCAGCCGCTGAAGGGCCACTACGCGAAGGCGAAGGTCGAGCCGGGTCGCGGTCTGTGGGAGTTCCGCGTTGCTGCCGAGGATCTCGGCAAGTACGCGGTGGGCTCGGAGATCAAGGCGGACGACGTGTTCTCCGTCGGCCAGATCGTGGATGTCGCCGGCGTGTCGAAGGGCAAGGGCTTCCAGGGCACGATCAAGCGCTGGAACTTCAAGATGGGCGACGCCACCCACGGCAACTCGCTGTCGCATCGCGCGCCGGGCTCGATCGGTCAGCGCCAGACCCCGGGTCGCGTGTTCCCCGGCAAGAAGATGGCCGGCCAGATGGGCAACGTGAATCGTACCCAGCAGGGCCTGGAAGTGGTCAAGGTCGACGCCGAGCGTCATCTGATCGCGGTCAAGGGTGCGGTACCGGGTGCCACCGGTAGCGACGTCGTCATCCGCCCGACGACCAAGAGCTGA
PROTEIN sequence
Length: 214
MSIGLVGRKCGMSRLFTEDGRSIPVTLIEATPNRVTQVKTDDNDGYSAVQVSAGSKRANLLTQPLKGHYAKAKVEPGRGLWEFRVAAEDLGKYAVGSEIKADDVFSVGQIVDVAGVSKGKGFQGTIKRWNFKMGDATHGNSLSHRAPGSIGQRQTPGRVFPGKKMAGQMGNVNRTQQGLEVVKVDAERHLIAVKGAVPGATGSDVVIRPTTKS*