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SCNpilot_expt_500_bf_scaffold_11912_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3..569)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00034CAA07 similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 194.0
  • Bit_score: 244
  • Evalue 9.50e-62
Type I secretion protein TolC {ECO:0000313|EMBL:AHX15692.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 189.0
  • Bit_score: 180
  • Evalue 1.80e-42
TolC family type I secretion outer membrane protein; K12340 outer membrane channel protein similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 187.0
  • Bit_score: 135
  • Evalue 2.00e-29

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Taxonomy

Dyella jiangningensis → Dyella → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGCAATTGAAGCTGCTCACCCTGGCCCTGGCGCTGGCCGCCGTCTCGCTGCCCAGCCATGGCGAGGATCTGCTCGATGCCTATCGCGACGCGCGCGCCAATGACCCGGTACTGGCCCAGGCCGACGCGACGCGGCTGGCCACCGGCGAAGGCGTGCCGCAGGCGCGTGCCGGGCTGCTGCCGCAGATCGACGGTTCGCTCACCCTGCAACAGGCCAACGGCGGCCAGGGCAGCAACAGCCTGGACTTCGGTACCGGCGCCAACAGCTTCCTGTGCAGCGGCATCGCCGCCGGCAGCGGCAACTACACCTGTACCGGCCCGCTGGCGTCCAACGGCACCGCCTCCGACGGCGGCCACCTGCGCACGCGCAGCCTCAATGCCACGCTGACCCAGACCGTTTTCGACTTCAGCAAGTACGCCAACCTCAAGGCCGCGCACTCCGCCAAGGATGCGCAGGACGCGACCTACCAGGCCGCAGCGCAGGACCTGCTGGTGCGCGTCACCGCGGCGTACTTCACCGTGCTCAACGACGAGGATCAGCTGACCTTCGCCAAGGCCAACGAGGAC
PROTEIN sequence
Length: 189
MQLKLLTLALALAAVSLPSHGEDLLDAYRDARANDPVLAQADATRLATGEGVPQARAGLLPQIDGSLTLQQANGGQGSNSLDFGTGANSFLCSGIAAGSGNYTCTGPLASNGTASDGGHLRTRSLNATLTQTVFDFSKYANLKAAHSAKDAQDATYQAAAQDLLVRVTAAYFTVLNDEDQLTFAKANED