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SCNpilot_expt_500_bf_scaffold_12750_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 1552..2196

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VUY7_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 84.9
  • Coverage: 199.0
  • Bit_score: 344
  • Evalue 1.00e-91
  • rbh
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 199.0
  • Bit_score: 341
  • Evalue 1.60e-91
  • rbh
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.9
  • Coverage: 215.0
  • Bit_score: 350
  • Evalue 1.50e-93

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Taxonomy

RIFOXYA1_FULL_Rhodanobacter_67_6_curated → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
ATGGAGCCCGTCGATGACATCACCGATGGCAGCGGAGCGTCGGCCGTGAATGCCGCCGCCGGCATGCTCGAGGCCGACCTGCTCGCCGCGGGCGAGCCGGGCGCTGCGCGCGCGGTGCCGGCCACGCTGGATGCGTTCCTGGCCGACGTGGAGCGCCGCGCGTTCCGCATGGCCGAGCTGCAGTTGCGCCATCGCGAGGACGCCATGGACGCGGTGCAGGACGCCATGCTGCGACTGGTACGGCATTATCGCGACAAGCCGGCCGCGGAATGGGCGCCGCTGTTCTGGGGCATCCTGCGTCGACGCATCGTGGACCTGCAGCGCCGGCGCAAGGTGCGCTCGATCGTCGTCGGCTGGCTCGGCGGCGGGCATGACGACGGCGGCGACGAGCTGCCCGTGTGGGAGCCGGCCGACCCGGGCAAGGACCCGCTGGGCCGGCTGCACGACGCGCAGTCGTACGCGGACATGGCCGCGGCGGTGCAGCGCTTGCCCAGGCGCCAGCGCGAGGCGTTCATCCTGCGCATGCTGGAAGGGCTCGACGTGGCGGAGACCGCACGCGCCATGGGCTGCGGCGAAGGCAGCGTGAAAACCCATCTGTCGCGCGCCATGCATCAGCTGCGCGACCAACTGGAGGATTGGCGATGA
PROTEIN sequence
Length: 215
MEPVDDITDGSGASAVNAAAGMLEADLLAAGEPGAARAVPATLDAFLADVERRAFRMAELQLRHREDAMDAVQDAMLRLVRHYRDKPAAEWAPLFWGILRRRIVDLQRRRKVRSIVVGWLGGGHDDGGDELPVWEPADPGKDPLGRLHDAQSYADMAAAVQRLPRRQREAFILRMLEGLDVAETARAMGCGEGSVKTHLSRAMHQLRDQLEDWR*