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SCNpilot_expt_500_bf_scaffold_12750_8

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 4325..4741

Top 3 Functional Annotations

Value Algorithm Source
cytidine deaminase (EC:3.5.4.5) similarity KEGG
DB: KEGG
  • Identity: 76.3
  • Coverage: 139.0
  • Bit_score: 216
  • Evalue 6.40e-54
Cytidine deaminase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WKQ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.0
  • Coverage: 138.0
  • Bit_score: 223
  • Evalue 1.30e-55
Cytidine deaminase {ECO:0000313|EMBL:EIM00051.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.0
  • Coverage: 138.0
  • Bit_score: 223
  • Evalue 1.80e-55

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGCCCGCAAGCCCCCCCACCCTGGATGACCTGCTCACGCTGGCGCGCGCCGCGCGCGAACACGCCTACGCGCCGTATTCCCGCTTCCACGTGGGTGCCGCGGTACTGACCCGTGACGGCCGGACGTTCGGCGGGTGCAACGTGGAGAACGCCGCCTACGGCCTGTGCAACTGCGCCGAACGCACGGCCCTGTTCAGCGCGGTCGCCGCCGGTTGCCGACCCGGCGATTTCGCTGCCATCGCGGTGGTCGCCGATACCCCGGAGGCAGTCACGCCCTGCGGCGCCTGCCGCCAGGTGATGGCCGAATTGTGTGACGAGGCTACCCCGGTGCTGCTGGCCAACCTCACCGGCGCCACCCGCGAAACCAGCGTGGCCGCGCTGCTGCCCGGCTCGTTCAAGCTGCCGCTGCGAGCTTGA
PROTEIN sequence
Length: 139
MPASPPTLDDLLTLARAAREHAYAPYSRFHVGAAVLTRDGRTFGGCNVENAAYGLCNCAERTALFSAVAAGCRPGDFAAIAVVADTPEAVTPCGACRQVMAELCDEATPVLLANLTGATRETSVAALLPGSFKLPLRA*