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SCNpilot_expt_500_bf_scaffold_14122_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3..767)

Top 3 Functional Annotations

Value Algorithm Source
Multidrug resistance efflux pump n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VY44_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 255.0
  • Bit_score: 434
  • Evalue 6.70e-119
Multidrug resistance efflux pump {ECO:0000313|EMBL:EIL92135.1}; TaxID=1163407 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter spathiphylli B39.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 255.0
  • Bit_score: 434
  • Evalue 9.40e-119
multidrug resistance efflux pump similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 255.0
  • Bit_score: 421
  • Evalue 2.40e-115

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Taxonomy

Rhodanobacter spathiphylli → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 765
GTGGTGCAGATCACCCCGCAGGTGCCCGGCACCGTGGTCAGCATCGGCGCCGACGACGGCAACCTGGTGCACGCCGGCGACGTGCTGGTGAAACTCGATCCCAGCGATGCCGACGTGGCCCTGGCCGAGGCGAAGGCCAACCTGGCGCTGACCGTGCGCAAGGTGCGCGGCCTTTACTCCAGCGTCAGCGGCGCACACGCCGACGTCGCCGCCAGCCAGACGGCGGTGGCGAAGGCGCGCTCCGACTACGAGCGGCGCGTGGCGCTGGCCAAGTCCGGCGCGATCTCGACCGAGGAACTGGCGCATGCCCGCGACGCGCTGACCACCGCGCAGAACGCCCTCATCACGGCGCAGCAGCAGTACCAGACCAGCAAGGTGCTGGTCGACGACACCGTGGTCGCCTCGCACCCGGACGTGCAGGTGGCGGCGGCCCAGCTGCGCGCCGCCTACCTCGCCGACGCGCGCACGCAGTTGCTGGCGCCGGTGGACGGCTATGTGGCCAAACGCTCGGTGCAGGTCGGCCAGCGCGTGCAGCCCGGCACGCCGCTGATGGCGGTGGTGCCGCTTCACCAGGTGTGGATCGACGCCAATTTCAAGGAGACCCAGCTCACCGACATGCGCATCGGCCAGCCGGTGGAGATCGAATCGGACGTCTACGGCGGCGCGGTGAGCTACACCGGCAAGGTGGAGAGCCTGGGCATCGGCACCGGCAGCGCGTTCTCGCTGCTGCCGGCGCAGAACGCCACCGGCAACTGGATCAAGATC
PROTEIN sequence
Length: 255
VVQITPQVPGTVVSIGADDGNLVHAGDVLVKLDPSDADVALAEAKANLALTVRKVRGLYSSVSGAHADVAASQTAVAKARSDYERRVALAKSGAISTEELAHARDALTTAQNALITAQQQYQTSKVLVDDTVVASHPDVQVAAAQLRAAYLADARTQLLAPVDGYVAKRSVQVGQRVQPGTPLMAVVPLHQVWIDANFKETQLTDMRIGQPVEIESDVYGGAVSYTGKVESLGIGTGSAFSLLPAQNATGNWIKI