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SCNpilot_expt_500_bf_scaffold_15852_3

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: 2014..2223

Top 3 Functional Annotations

Value Algorithm Source
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter sp. 115.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 70.0
  • Bit_score: 147
  • Evalue 8.20e-33
valyl-tRNA synthetase (EC:6.1.1.9) similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 70.0
  • Bit_score: 142
  • Evalue 4.60e-32
Valine--tRNA ligase n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VSD3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 70.0
  • Bit_score: 147
  • Evalue 5.90e-33

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 210
ATGGAAAAGAGTTTCGAGCCGGCCCGGATCGAGTCGAAGTGGTACGAGCGCTGGGAAGCCAGCGGCGCGTTCAAGCCGAGCGGCCAGGGCGAGCCGTACTGCATCCTGCTGCCGCCGCCGAACGTCACCGGCACGCTGCACATGGGGCATGCGTTCCAGCAGACGGTGATGGACATGCTGGTGCGCTACCAGCGCATGCGCGGCATGAAC
PROTEIN sequence
Length: 70
MEKSFEPARIESKWYERWEASGAFKPSGQGEPYCILLPPPNVTGTLHMGHAFQQTVMDMLVRYQRMRGMN