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SCNpilot_expt_500_bf_scaffold_15727_5

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(3936..4580)

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEQ9_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 214.0
  • Bit_score: 363
  • Evalue 2.10e-97
TonB-dependent receptor protein {ECO:0000313|EMBL:EIL97950.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 214.0
  • Bit_score: 363
  • Evalue 2.90e-97
TonB-dependent vitamin B12 receptor similarity KEGG
DB: KEGG
  • Identity: 80.2
  • Coverage: 212.0
  • Bit_score: 361
  • Evalue 1.90e-97

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 645
AAGCTCACCGCCAGCTACGGCAGCGCCTTCCACGCGCCCACCTTCAACGATCTCTACTACCCCTACGGCAGCGGCAATCCGGACCTGAAACCGGAGACCTCGCGCAGCGCCGAGCTGGGCCTTAGCCGGCAGCACGATGGCTGGAACTGGGCGCTGAACGCCTACCAGACGCGCATCGACCAGCTGATCGCGCTGGACAGCCAGTACTTCCCGCGCAACATCAGCAAGGCGCGCATCCGCGGCGTGGAAGGCCAGTTCGGCGCCCGGCTCGGCGGCTGGCAGCTGCAGAGCTACCTGACCTGGCTGCAGCCGCGCAACGAGGATGGCGGCCCGAACGACGGCAACGTGCTGCCGCGCCGCGCCGAGCAGACGGCGCGCATCGACCTGGACCGCCGCTACGGCGCCTTCGGCGTCGGCGCCACGTTCAACGCCGCCGGCCACCGCTATGACGATGCGGCCAACGCACACCGACTGGGCGGTTACGCCACCACCGACTTGCGTGCGAGCTGGCAGTTCGACCGCGCCTGGCAACTGGAGGCGCGCCTGGCCAATGCGTTCGACCGCCACTACGAAACGGTCTGGTACTTCAACCAGCCCGGGCGCGAGCTGCTGCTGACCTTGCGCTACCGCCCCGGCGCGCGCTGA
PROTEIN sequence
Length: 215
KLTASYGSAFHAPTFNDLYYPYGSGNPDLKPETSRSAELGLSRQHDGWNWALNAYQTRIDQLIALDSQYFPRNISKARIRGVEGQFGARLGGWQLQSYLTWLQPRNEDGGPNDGNVLPRRAEQTARIDLDRRYGAFGVGATFNAAGHRYDDAANAHRLGGYATTDLRASWQFDRAWQLEARLANAFDRHYETVWYFNQPGRELLLTLRYRPGAR*