ggKbase home page

SCNpilot_expt_500_bf_scaffold_18664_4

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(2606..2782)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type antimicrobial peptide transport system, permease component n=1 Tax=Rhodanobacter denitrificans RepID=M4NEN8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 58.0
  • Bit_score: 103
  • Evalue 6.30e-20
ABC-type antimicrobial peptide transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 86.2
  • Coverage: 58.0
  • Bit_score: 103
  • Evalue 2.00e-20
ABC-type antimicrobial peptide transport system, permease component {ECO:0000313|EMBL:AGG87978.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 58.0
  • Bit_score: 103
  • Evalue 8.80e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 177
ATGGTGCTGGCCTATGCACTCAATCTGTTGCTGATGACGCACTACGAACTGCCGCGCCTGCCGCTGGCCTACCTGCCGATCGGCGCCGTCGCACTGTGGCTGCTCGGCCAGCTCGCCGTGCTCGGCCCCGCGTTGCGCGCCGCGGCCGTGCCGCCGGTGGTGGCGACGAGGGGATAG
PROTEIN sequence
Length: 59
MVLAYALNLLLMTHYELPRLPLAYLPIGAVALWLLGQLAVLGPALRAAAVPPVVATRG*