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SCNpilot_expt_500_bf_scaffold_18664_6

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(5261..6307)

Top 3 Functional Annotations

Value Algorithm Source
Antimicrobial peptide ABC transporter permease n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WJL8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 350.0
  • Bit_score: 544
  • Evalue 8.20e-152
  • rbh
Antimicrobial peptide ABC transporter permease {ECO:0000313|EMBL:EIL99659.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 350.0
  • Bit_score: 544
  • Evalue 1.20e-151
ABC-type antimicrobial peptide transport system, permease component similarity KEGG
DB: KEGG
  • Identity: 74.5
  • Coverage: 349.0
  • Bit_score: 507
  • Evalue 3.50e-141

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1047
GCCGAGGTGACGCCATCGCCGGACATCTACGCGCGGGCAAGGGAGGATCTTGCCGTGATCCGGCAAGTGCCCGGCGTACTGGACGTGGCCCTGGTCAACCAGTTGCCGCTTGGCGGCTCCTCATCCAATGCCAGCATCAAGCTGGACCCGGAGCAACGCCAGCCGACCCTCAGCGCCGGGACCTATTTCGGCGGGAATCTGGCGCAGACGATGGGTCTGCGCCTGGTGGCGGGGCGCCACCTGCGGCCCGACGAAGTGCTCGACGCCGATGTCGTGCTCAAGGCACTGGCCACCGGCGACACCAAGGTCATCGCGCCGGTCACGGTGATCACGCAGGCCATGGCGCAACGGCTGTGGCCGGATGCCGAAGCGCTCGGCAAGACGATCTACGTCGGTCCGGTCGGCGTGCGCGTGGTCGGCGTGGTCGCCGACCTGGCGCGCGCCAATGCCTACGACGACGCGACCGCGCACTACTCGATGATCCTGCCGATGTTCATGGGCGCGGGCAAGGACCAGAGCTACCTGATTCGCACCCGCCCCGAGGATCGCCAGGCGGTGCTGAAGGCCGCCGTGGCGGCGCTGAAGAAAGCCGACCCGCGGCGGGTGGTGACCGAGCAGCGCACCTACGACGAAGTGCGCCACAAGTTCTTCGAGAACGATCGCTCGATGGCCGGCATCCTGGTGGGGGCGATCGCCGCGCTGCTCATCGTCACCGCGCTGGGCATCGTCGGTCTGGCCAGTTTCTGGGTGGCGCAGCGCCGGCGCACCATCGGCGTGCGCCGCGCGCTGGGGGCCACGCGCCGCAACATCCTCAATTATTTTCAGACCGAAAACCTGCTGCTGGCCACCATCGGCATCGTGCTGGGCATGGTGCTGGCCTATGTGATCAACCTGTTCCTGATGCTGCACTACGAGTTGCCGCGCTTGCCATGGATCTACTTCCCGACAGGCGCCATCGCGCTGTGGCTGATCGGCCAGCTCGCCGTGCTCGGACCCGCGTTGCGCGCCGCGGCGGTGCCGCCGGTGGTGGCAACGAGGTCGGTGTGA
PROTEIN sequence
Length: 349
AEVTPSPDIYARAREDLAVIRQVPGVLDVALVNQLPLGGSSSNASIKLDPEQRQPTLSAGTYFGGNLAQTMGLRLVAGRHLRPDEVLDADVVLKALATGDTKVIAPVTVITQAMAQRLWPDAEALGKTIYVGPVGVRVVGVVADLARANAYDDATAHYSMILPMFMGAGKDQSYLIRTRPEDRQAVLKAAVAALKKADPRRVVTEQRTYDEVRHKFFENDRSMAGILVGAIAALLIVTALGIVGLASFWVAQRRRTIGVRRALGATRRNILNYFQTENLLLATIGIVLGMVLAYVINLFLMLHYELPRLPWIYFPTGAIALWLIGQLAVLGPALRAAAVPPVVATRSV*