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SCNpilot_expt_500_bf_scaffold_16915_1

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(2..715)

Top 3 Functional Annotations

Value Algorithm Source
O-antigen polymerase n=1 Tax=Rhodanobacter denitrificans RepID=I4WK53_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 212.0
  • Bit_score: 216
  • Evalue 3.50e-53
lipid A core-O-antigen ligase-like enyme similarity KEGG
DB: KEGG
  • Identity: 51.9
  • Coverage: 212.0
  • Bit_score: 216
  • Evalue 1.10e-53
Lipid A core-O-antigen ligase-like enyme {ECO:0000313|EMBL:AGG90757.1}; Flags: Precursor;; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.9
  • Coverage: 212.0
  • Bit_score: 216
  • Evalue 4.90e-53

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 714
ATGACCGATACCCGCCTCGCGCAGGTGTTCGCGCGCCCCGGGCCGGCGTGGACAGTGTCGATCCTGCTGGCCCTGATGCCGCTGTCGTTCTCGATCGACTGGGGGATCAAGGCGCTGCCGCCGGCGCTGCTGTTCCTGCTTGGACTGGCGCTGGTGGCGAGCACCGCCTCGATCCGGCGCAGCTATCGCGCGGCGTGGCCGCCGGTGGCGGTGGCGCTGGCGATGATCGGATTCGTGATCTTCAACGTGCTGCTGCACGACCTGGGCTGGCGACCGCTGGATCGCCCGGCGCACATTCTGCTGTTCCTGGTGGTGGCGGCGTGCTTCAGCCTGCCGTTGCGGATGCGCGTGGTGTGGGCCGGTTTCAGCCTCGGCGCCATCGTGCTGGGCGCGGCCGCCGTGGTGCAGGCCTACGCGCTCGGCATCGACCGTCCGCACGGCCTCAATGGCGGCCCGTCGGCCTCGATCGAACTGGCCACGGTGTTGCTGGGCCTGTCGACGATGGCGCTGGTGCAATTCCTGGCGCGCGGCACGGGGCGCCGGGAACGCTGGCTGCATCTGGTGGCGATGGGCTGCGCCATGTACGGCGCGCTGCTGACCCAGAGCCGCGGCCCGCTGCTGGCATTTGCGCCGGTGTTCCTGCTGCTGGTGCTGCTGCACGCGCGGCGCTGCGGACACTGGCGCTCCAGCCTGCTGCTGGTCGGTGCCGTGTCT
PROTEIN sequence
Length: 238
MTDTRLAQVFARPGPAWTVSILLALMPLSFSIDWGIKALPPALLFLLGLALVASTASIRRSYRAAWPPVAVALAMIGFVIFNVLLHDLGWRPLDRPAHILLFLVVAACFSLPLRMRVVWAGFSLGAIVLGAAAVVQAYALGIDRPHGLNGGPSASIELATVLLGLSTMALVQFLARGTGRRERWLHLVAMGCAMYGALLTQSRGPLLAFAPVFLLLVLLHARRCGHWRSSLLLVGAVS