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SCNpilot_expt_500_bf_scaffold_33556_2

Organism: SCNPILOT_EXPT_300_BF_Rhodanobacter_67_27

near complete RP 46 / 55 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 2
Location: comp(449..1015)

Top 3 Functional Annotations

Value Algorithm Source
RNAse R (EC:3.1.-.-) similarity KEGG
DB: KEGG
  • Identity: 89.6
  • Coverage: 193.0
  • Bit_score: 329
  • Evalue 5.40e-88
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=666685 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter denitrificans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 193.0
  • Bit_score: 329
  • Evalue 2.40e-87
Ribonuclease R n=1 Tax=Rhodanobacter denitrificans RepID=M4NGE8_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 193.0
  • Bit_score: 329
  • Evalue 1.70e-87

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Taxonomy

Rhodanobacter denitrificans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
CACATCAGCCAGCTGGTGAACGACTACTACCACTTCGACGCGGTGCGCAAGCTGCTCAAGGGTGAGCGCACCGGCGCGCAGTTCCGCCTCGGCGACCACGTGCGCATCCAGGTGCTGCGCGCGAGCCTGGAGGATCGCAAGATCGACTTCCGCCTGGTCTCGCCGCGCACGTCGGCCCCGGCTCCGGCCCCGACCGGCAGCGGCAAGGCGTATGACTATGCCGCCGCGGGCGAGCGCTATTCGCTGCCGAAGAAGGCGGCCGCCACGACCAAGGCACCGGGCATGTTCGGTCGCGCCGCCAAGGCGATCGGCCGCGCATTCGGCCGCAAGGAGGCCGAGGTTGCCACACCGGCGCCGGCCCCGCGCAAGGCGGCGGCGAGCGATAATCCGCCGCCGCGTGCACAGTCGCCGGCAGGGCGCCAGCATCAGGGCCGCAGGGTCGAACCGTCGTCCGATCGTCGCCCGCGCAAGGACGGTTCCGCCAGGCGCGCGCCGGCCCCGGCTGCCGTCCCGCCGGCGCCGAAGAAGCACGGCGGCCGCAAACCGAAACCGAAAGGCAAGCCATGA
PROTEIN sequence
Length: 189
HISQLVNDYYHFDAVRKLLKGERTGAQFRLGDHVRIQVLRASLEDRKIDFRLVSPRTSAPAPAPTGSGKAYDYAAAGERYSLPKKAAATTKAPGMFGRAAKAIGRAFGRKEAEVATPAPAPRKAAASDNPPPRAQSPAGRQHQGRRVEPSSDRRPRKDGSARRAPAPAAVPPAPKKHGGRKPKPKGKP*