ggKbase home page

SCNpilot_expt_500_bf_scaffold_8766_4

Organism: SCNPILOT_CONT_300_BF_Bacteroidetes_43_15

near complete RP 51 / 55 MC: 1 BSCG 48 / 51 MC: 4 ASCG 12 / 38 MC: 2
Location: 5917..7608

Top 3 Functional Annotations

Value Algorithm Source
Amino acid permease-associated region n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EDI7_RUNSL similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 562.0
  • Bit_score: 712
  • Evalue 2.80e-202
  • rbh
amino acid permease-associated protein similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 562.0
  • Bit_score: 712
  • Evalue 8.90e-203
  • rbh
Amino acid permease-associated region {ECO:0000313|EMBL:AEI47933.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 562.0
  • Bit_score: 712
  • Evalue 4.00e-202

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Runella slithyformis → Runella → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1692
ATGTTCGATAAACTAACAAGGAAAAAAACAATAGCGCAAGTACAACATTCCCACACCGATGTAACCCCGGAATTGTTGGGAATAGATGAAAATATTCCGCAAAAGGTTGGTGAGCATACGATGAAGCGTACGCTTAAAGTAAAAGACCTGGTGATGATGGGCATTGCCGCGGTGATCGGTGCAGGTATTTTCAGTACCATTGGCCAGGCTGCCTTCCAGGGCGGGCCGGGTGTAATTTTCCTGTTTCTTATTACTGCGGTCACTTGCGGCTTTACGGCCTTATGTTATGCAGAGTTTGCCGCGCGTATCCCGGTATCGGGGAGTGCATACACTTATTCTTATGTGGCTTTCGGGGAGATCATAGCCTGGGTTATCGGCTGGTCGCTGATCCTGGAGTATGCCATTGGTAATATTGTGGTCGCCATCAGCTGGAGCAGTTATTTTAATAATATGCTGGAGGCTGTCAATATTCATCTGCCTGCCTGGCTGATCTCTGATGTGAAGACGGCACAAGATGCCTTCCTCAAAGGAGCTAATAATATTCATGCAAGGGCCTGGGCCACTGCACCGGGTATAGGCAACACTAAGCTGATCATGAACCTACCGGCTTTCGTCGTGGTGATCCTGGTGACCTGGCTGGCTTATATCGGCATTAAAGAGAGTAAAAAGAGCGCCAATGCTATGGTCGTGGTGAAACTGGCTATATTAGTGGTGGTGATCGCACTGGGCTTCTTTTATATTAATTCGGATAACTATGTACCCTTTATGCCGAATGGCTTTAAAGGCGTATTGATGGGGGTATCAGCGGTGTTTTATGCCTACATAGGCTTTGATGCGATCTCAACTACGGCTGAAGAGTGTGAAAATCCGCAGAGGGATATGCCGCGCGGTATGATCTATTCTTTACTCATCTGTACCGGCATTTATGTATTGACAGCCTTGGTGATTACGGGGATGGTACATTTCAGTAAGTTTGAGCATGTGACCGATCCTTTGGCTTTTGTTTTTGAGCAGATCAACCAGCCTATTGTAGGAAAGATCATTTCTTTTAGTGCTGTAGTAGCGGCCACCAGTGTGATGCTGATCTTCCAGATCGGGCAGCCCAGGATATGGATGAGCATGAGCCGAGATGGACTGCTGCCGAAGAAGTTTTCAAAAATTCATCCTAAGTTTAAAACACCTGGTTTTGCTACCATTATTACCGGTTTGATCGTTGCCCTACCGGCATTGTTTATAGATGCCAATATCGTTACTGATCTTACCAGTATAGGTACCTTGTTTGCCTTTGTGCTGGTCTGTGCCGGTGTGTTGCGTTTGCCCAAAGCCGGTCCTGATCAGAAGTTTAAATTGCCTTATATCAATTCCAGGTATATTGCCCCTGCATTATTGGCTGTTTTCTTGTTTTTCACCTGGGATAAGTTTACTTATAATTACCAGCATTTATATGAAATAAAGTTTGACGAGATCTTATTTGTATTGTATGTGATCGCCGCTACGGCCATAGTGGCTTATTCCGCTTATCGTCAATATACTTTGATCCCGGTATTGGGTCTATTGTGTTGTATGTACCTGATGATAGAGATCCCTGCCAATAGCTGGATGGTATTCCTATGCTGGATGGGTGCGGGCCTGATCGTCTATTTCCTGTTCGGGTACAAAAACAGTAAGCTCAATAAGGCTAATGTAAAATAG
PROTEIN sequence
Length: 564
MFDKLTRKKTIAQVQHSHTDVTPELLGIDENIPQKVGEHTMKRTLKVKDLVMMGIAAVIGAGIFSTIGQAAFQGGPGVIFLFLITAVTCGFTALCYAEFAARIPVSGSAYTYSYVAFGEIIAWVIGWSLILEYAIGNIVVAISWSSYFNNMLEAVNIHLPAWLISDVKTAQDAFLKGANNIHARAWATAPGIGNTKLIMNLPAFVVVILVTWLAYIGIKESKKSANAMVVVKLAILVVVIALGFFYINSDNYVPFMPNGFKGVLMGVSAVFYAYIGFDAISTTAEECENPQRDMPRGMIYSLLICTGIYVLTALVITGMVHFSKFEHVTDPLAFVFEQINQPIVGKIISFSAVVAATSVMLIFQIGQPRIWMSMSRDGLLPKKFSKIHPKFKTPGFATIITGLIVALPALFIDANIVTDLTSIGTLFAFVLVCAGVLRLPKAGPDQKFKLPYINSRYIAPALLAVFLFFTWDKFTYNYQHLYEIKFDEILFVLYVIAATAIVAYSAYRQYTLIPVLGLLCCMYLMIEIPANSWMVFLCWMGAGLIVYFLFGYKNSKLNKANVK*