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SCNpilot_expt_500_bf_scaffold_537_76

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: comp(77632..77922)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L28 n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P928_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 171
  • Evalue 3.10e-40
rpmB; 50S ribosomal protein L28; K02902 large subunit ribosomal protein L28 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 97.0
  • Bit_score: 171
  • Evalue 1.70e-40
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 97.0
  • Bit_score: 171
  • Evalue 4.30e-40

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Taxonomy

Afipia broomeae → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGTCACGGCGCTGCGAATTGACGGCCAAGGGGCCGCAGGTCGGCCACAAGGTCAGCCACTCGAACCACAAGTCCAAGCGCCGGTTTCTGCCGAACCTGTGCAATGTCACGCTGATGTCGGAAGCGCTCGGCCGCTCGGTGCGGCTGCGGATCTCGACCAACGCGATCAAGAGCGTCGACCATAATGGCGGTCTCGATGCCTTCCTGCTCAAGGCCAACGCCGCGACGCTGTCGCCGCGCGCCGTCGACCTGAAGCGCCAGATCGAGAAGAAGCTCGCCGCCGCGAGCTAA
PROTEIN sequence
Length: 97
MSRRCELTAKGPQVGHKVSHSNHKSKRRFLPNLCNVTLMSEALGRSVRLRISTNAIKSVDHNGGLDAFLLKANAATLSPRAVDLKRQIEKKLAAAS*