ggKbase home page

SCNpilot_expt_500_bf_scaffold_7522_1

Organism: SCNPILOT_EXPT_1000_BF_Afipia_63_13

megabin RP 49 / 55 MC: 11 BSCG 48 / 51 MC: 11 ASCG 13 / 38 MC: 3
Location: comp(2..223)

Top 3 Functional Annotations

Value Algorithm Source
Putative Holliday junction resolvase {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086483}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00651, ECO:0000256|SAAS:SAAS00086510};; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.2
  • Coverage: 74.0
  • Bit_score: 131
  • Evalue 6.50e-28
Holliday junction resolvase-like protein; K07447 putative holliday junction resolvase [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 83.8
  • Coverage: 74.0
  • Bit_score: 129
  • Evalue 4.20e-28
Holliday junction resolvase n=1 Tax=Afipia birgiae RepID=UPI0002DDDFC8 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 74.0
  • Bit_score: 134
  • Evalue 5.40e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Afipia clevelandensis → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 222
ATGCCCGCGTCCATCCTACCGCTGATCGAAGCCGCCGCGCTCTGGCCTCCACGGGGAGCCCTGATCGGACTCGACCTCGGCACCAAGACCATCGGCGTCGCCGTCTCCGATCCGGACCGCAAGCTCGCGACCGGGATCGAGACCATTCAGCGCAAGGCCTTCACCGCCGATGCGACCCGGCTGCTGGCACTGGCCGGCGAGCGCAACGTCACGGGCTTCGTC
PROTEIN sequence
Length: 74
MPASILPLIEAAALWPPRGALIGLDLGTKTIGVAVSDPDRKLATGIETIQRKAFTADATRLLALAGERNVTGFV