ggKbase home page

SCNpilot_expt_500_bf_scaffold_381_10

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: comp(6589..7026)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Latimeria chalumnae RepID=H3AXH0_LATCH similarity UNIREF
DB: UNIREF100
  • Identity: 84.2
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 4.20e-65
Uncharacterized protein {ECO:0000313|Ensembl:ENSLACP00000014341}; TaxID=7897 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Coelacanthiformes; Coelacanthidae; Latimeria.;" source="Latimeria chalumnae (West Indian ocean coelacanth).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 139.0
  • Bit_score: 255
  • Evalue 5.90e-65
homeobox protein SIX1-like similarity KEGG
DB: KEGG
  • Identity: 84.9
  • Coverage: 139.0
  • Bit_score: 254
  • Evalue 2.20e-65

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Latimeria chalumnae → Latimeria → Coelacanthiformes → Chordata → Metazoa

Sequences

DNA sequence
Length: 438
GTGAAAGCTAAAGCCGTTGTTGCATTTCGTCGAGGAAACTATCGTGAACTCTATCACATTCTCGAACGTTATCAATTTGCACCATGTAGTCATCCTCAATTACAACAACTATGGTTACAAGCACATTACAATGAAGCTGAAAAGCAACGTGGCCGACCGTTAGGTGCTGTTGGTAAATATCGAGTCCGACGAAAATATCCTCTTCCACGAACGATCTGGGACGGCGAAGAGACAAGTTATTGTTTCAAAGAAAAGTCTCGTAATGTTCTACGTGATTGGTATCTGCACAATCCCTATCCATCGCCGCGTGAAAAACGTGAACTTGCCGAAGCAACAAGTTTAACAACGACACAAGTATCGAATTGGTTCAAAAATCGACGACAACGTGATCGAGCATCGGAAACAAATGATAGGCAAGTTATTGTATTTTTCTTTTAA
PROTEIN sequence
Length: 146
VKAKAVVAFRRGNYRELYHILERYQFAPCSHPQLQQLWLQAHYNEAEKQRGRPLGAVGKYRVRRKYPLPRTIWDGEETSYCFKEKSRNVLRDWYLHNPYPSPREKRELAEATSLTTTQVSNWFKNRRQRDRASETNDRQVIVFFF*