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SCNpilot_expt_500_bf_scaffold_1081_9

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: 8185..8814

Top 3 Functional Annotations

Value Algorithm Source
Exosome complex exonuclease RRP46 n=1 Tax=Crassostrea gigas RepID=K1RHF5_CRAGI similarity UNIREF
DB: UNIREF100
  • Identity: 25.8
  • Coverage: 194.0
  • Bit_score: 104
  • Evalue 1.00e-19
Exosome complex exonuclease RRP46 {ECO:0000313|EMBL:EKC43209.1}; TaxID=29159 species="Eukaryota; Metazoa; Lophotrochozoa; Mollusca; Bivalvia; Pteriomorphia; Ostreoida; Ostreoidea; Ostreidae; Crassostrea.;" source="Crassostrea gigas (Pacific oyster) (Crassostrea angulata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 25.8
  • Coverage: 194.0
  • Bit_score: 104
  • Evalue 1.40e-19
exosc5, si:ch211-194n6.2, zgc:153707; exosome component 5; K12590 exosome complex component RRP46 similarity KEGG
DB: KEGG
  • Identity: 26.3
  • Coverage: 205.0
  • Bit_score: 101
  • Evalue 2.70e-19

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Taxonomy

Crassostrea gigas → Crassostrea → Ostreoida → Pteriomorphia → Mollusca → Metazoa

Sequences

DNA sequence
Length: 630
ATGACTGATCTCGATCAATCGGTATTATCTTCTCTTCATTGTACAGGTTCAGCAACATTTCGTTTCAATGATTCTCTTTGCACATGTCTATTAAACGGACCGGGCGAGCTTCGTCAACAACAAGACGCTACCAATCGTCTTCAAATCGATATTACATTTCAACCTCGTCCAGGAAATACGCAAGTCAAAGACAAACTTGTCGCACAATGGCTTGAAACACTAGTTGAATCAACAGTTCTTACTGAATATTATCCACGTTCGCAAATTAATCTTGTCATTTACGAAGAACAAAATCTTTCCAATGAAGCCACACTTCTTGCTTGTTTAGCCAATACACTTTGTCTGACAATGTTAGACGCTAATTTACCAATGAAATATGCGTTCGCTGCCGTACCTGTTGTTCAACATCCAAGCAAAGGACTTCTTGTTTTGCCAACAACAAAAGATGAATTAGCATCATCGACATATTTTGTTCTTGTTTTTGAAATTACGTTGAATGATGTGTTAGCTATGCATGCGAGCGGAGAATTCGATATGAAGACACTTGAACAATCGATCAATTTAGCCAAACCAATAGCAAGAGAAATATTTCAATTCTATAGACAAGAATTAGAAAAAAGATTGACATAA
PROTEIN sequence
Length: 210
MTDLDQSVLSSLHCTGSATFRFNDSLCTCLLNGPGELRQQQDATNRLQIDITFQPRPGNTQVKDKLVAQWLETLVESTVLTEYYPRSQINLVIYEEQNLSNEATLLACLANTLCLTMLDANLPMKYAFAAVPVVQHPSKGLLVLPTTKDELASSTYFVLVFEITLNDVLAMHASGEFDMKTLEQSINLAKPIAREIFQFYRQELEKRLT*