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SCNpilot_expt_500_bf_scaffold_1471_13

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: comp(6290..6613)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: homeobox protein vent1-like n=1 Tax=unknown RepID=UPI0001925739 similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 80.0
  • Bit_score: 83
  • Evalue 1.20e-13
similar to NK-2 class homeobox transcription factor; K09345 homeobox protein Nkx-2.5 similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 80.0
  • Bit_score: 83
  • Evalue 3.90e-14
Homeobox protein Nkx-2.5 {ECO:0000313|EMBL:CDG70753.1}; Flags: Fragment;; TaxID=6087 species="Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra.;" source="Hydra vulgaris (Hydra) (Hydra attenuata).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.8
  • Coverage: 80.0
  • Bit_score: 83
  • Evalue 1.70e-13

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Taxonomy

Hydra vulgaris → Hydra → Anthoathecata → Hydroidolina → Cnidaria → Metazoa

Sequences

DNA sequence
Length: 324
TTGAATTTTTCTTTATTTAAAGTTGATCTATCAGCTTGTGATTATGCGACACTACTTCGTGCAGCTAAAGTTTCCAATTCGACTAAAACTGAACATTCACCTGTAGAAATAGCCTCAGATAAAAAACGTACACGTATTCTATTTACATCTTGGCAAGTTGCTGAACTAGAACGATTATTTGCCGAACAAAAATATGTTTCAGCACAAGAACGTTCAGCTATATCGATGCGTATAGGTCTCTCGCCGACACAGATTAAAATCTGGTTTCAAAATCGTCGGTACAAATCAAAGAAAACAACAACACTCTATTTACGTACAGCATAA
PROTEIN sequence
Length: 108
LNFSLFKVDLSACDYATLLRAAKVSNSTKTEHSPVEIASDKKRTRILFTSWQVAELERLFAEQKYVSAQERSAISMRIGLSPTQIKIWFQNRRYKSKKTTTLYLRTA*