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SCNpilot_expt_500_bf_scaffold_1962_11

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: comp(4984..5289)

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: uncharacterized protein LOC100207753 n=1 Tax=unknown RepID=UPI0002B4CE64 similarity UNIREF
DB: UNIREF100
  • Identity: 47.9
  • Coverage: 96.0
  • Bit_score: 94
  • Evalue 6.60e-17
MAM and LDL-receptor class A domain-containing protein 2; Skeletal organic matrix MAM and LDL-receptor 2 {ECO:0000303|PubMed:23765379}; Short=SOM MAM and LDL-receptor 2 {ECO:0000303|PubMed:23765379};; Flags: Fragment;; TaxID=45264 species="Eukaryota; Metazoa; Cnidaria; Anthozoa; Hexacorallia; Scleractinia; Astrocoeniina; Acroporidae; Acropora.;" source="Acropora millepora (Staghorn coral).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 108.0
  • Bit_score: 93
  • Evalue 2.10e-16
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.8
  • Coverage: 107.0
  • Bit_score: 89
  • Evalue 8.70e-16

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Taxonomy

Acropora millepora → Acropora → Scleractinia → Hexacorallia → Cnidaria → Metazoa

Sequences

DNA sequence
Length: 306
ATGATTGAAACATCTTGGCCGACTGTCGAAGGTGATCGTGCACGTTTAGAAAGTCCACTTTTCGATGCAACGAATAATGATGCACAATGTTTTCGTTTTTGGTATCATATGCACGGTAGTGGCATCGGAACATTGAATGTCTATCTTTTCAATGGTTCATATGTACCTATATGGTCATTATCAGGTAATCGTGGCAATAATTGGCACGAAGGACAAGTATCTTATCTATCCAAATTACCATTTCAAATTGTGATCGAAGGTGTTGCTGGAATTGATTTTTTGGTAGATAGAATAAGGATAATTTAG
PROTEIN sequence
Length: 102
MIETSWPTVEGDRARLESPLFDATNNDAQCFRFWYHMHGSGIGTLNVYLFNGSYVPIWSLSGNRGNNWHEGQVSYLSKLPFQIVIEGVAGIDFLVDRIRII*