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SCNpilot_expt_500_bf_scaffold_2563_12

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: 8737..9021

Top 3 Functional Annotations

Value Algorithm Source
uncharacterized LOC754585 similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 53.0
  • Bit_score: 61
  • Evalue 1.40e-07
Eukaryotic translation initiation factor 3 subunit H {ECO:0000256|HAMAP-Rule:MF_03007}; Short=eIF3h {ECO:0000256|HAMAP-Rule:MF_03007};; TaxID=1257118 species="Eukaryota; Amoebozoa; Discosea; Longamoebia; Centramoebida; Acanthamoebidae; Acanthamoeba.;" source="Acanthamoeba castellanii str. Neff.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 46.6
  • Coverage: 73.0
  • Bit_score: 57
  • Evalue 1.20e-05

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Taxonomy

Acanthamoeba castellanii → Acanthamoeba → Longamoebia → Eukaryota

Sequences

DNA sequence
Length: 285
ATGATTTTGTTTTGTTTTGTTTTGCTTTTTAAATTGAATGTTCAGGTTATTTTAAAAATTATTAAACACGCTCATGAAGAAACAATCGAAGCCGCTCAAGGAGGTCTTCTCGGTTTAGTTAAAGATTCAACTCTTGAAGTCACCAATTGCTTCCCATTTCCAAATCAAAACAAACCCGAAAATGCCGATCTTGGTTCGTTGGCAAATTTTTCTCTCGAAAAATCAATTCATTTTTCTCTTCACATATTCAGATCTCGAACAATATCAGAAGGACATCATGCGTAG
PROTEIN sequence
Length: 95
MILFCFVLLFKLNVQVILKIIKHAHEETIEAAQGGLLGLVKDSTLEVTNCFPFPNQNKPENADLGSLANFSLEKSIHFSLHIFRSRTISEGHHA*