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SCNpilot_expt_500_bf_scaffold_4015_18

Organism: SCNPILOT_CONT_500_P_Rotifera_33_75

partial RP 42 / 55 MC: 35 BSCG 20 / 51 MC: 9 ASCG 28 / 38 MC: 22
Location: comp(10751..10945)

Top 3 Functional Annotations

Value Algorithm Source
Oncorhynchus mykiss genomic scaffold, scaffold_79 {ECO:0000313|EMBL:CDQ60250.1}; TaxID=8022 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.;" source="Oncorhynchus mykiss (Rainbow trout) (Salmo gairdneri).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.1
  • Coverage: 48.0
  • Bit_score: 54
  • Evalue 8.80e-05

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Taxonomy

Oncorhynchus mykiss → Oncorhynchus → Salmoniformes → Neopterygii → Chordata → Metazoa

Sequences

DNA sequence
Length: 195
ATGAAAGTTGAAATGTTAAATTATTGCGATTGTCATCTACAGTATGTTCATCATTGTCGAACGTATATTCGAGGAAATATTAAGAAGTATTGGTTTATTGCTCAAATGATTCGTGGAATGAGTATTGACGAAGCAATTAAACAATTGTCATTTCATAAATTACCTGTCGCAACTCAGATGCGTGATGTAGAATAA
PROTEIN sequence
Length: 65
MKVEMLNYCDCHLQYVHHCRTYIRGNIKKYWFIAQMIRGMSIDEAIKQLSFHKLPVATQMRDVE*