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SCNpilot_expt_500_bf_scaffold_8053_10

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(11073..11504)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003616157 similarity UNIREF
DB: UNIREF100
  • Identity: 69.0
  • Coverage: 142.0
  • Bit_score: 201
  • Evalue 4.10e-49
RNA polymerase subunit sigma-70 {ECO:0000313|EMBL:KHK99639.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 140.0
  • Bit_score: 202
  • Evalue 4.40e-49
sigma-70 region 2 domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 135.0
  • Bit_score: 174
  • Evalue 2.20e-41

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Taxonomy

Microbacterium mangrovi → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 432
GACGTCGTGCAGGCGACCTGGCTGACACTCGTGCGTCGGCACGAGTCCATCCACGACGCACGCGCGGTGGCCGGCTGGCTCACCACGTGCGCACGCCGCGAGGCTTGGCGCGCGGGCCGCGCGCACCAGCGTGCGAGACCGACCGACGACGTCGATCTCGAGCCGCTGCTGCCCAGCGACCCGTCCGCTGAAGAGAGCGCCCACCTCAGTGAGCGCGACCGTCGCCTGTGGGGCGCCGTCGCGACGCTCGAGGAGCGCTGCCGCCGACTGCTGCGCGTCGTCGCCTTCGAAGAACGCCCCGACTATGCGCGCATCGCGCAAGACCTCAGCATGCCGGTCGGCTCGATCGGCCCGACCCGGGGCCGCTGCCTCGGAAAGCTGCGTGTCGCCCTCGAGAAAGACGGATGGAGCGAGGATACCCATGACCTCTGA
PROTEIN sequence
Length: 144
DVVQATWLTLVRRHESIHDARAVAGWLTTCARREAWRAGRAHQRARPTDDVDLEPLLPSDPSAEESAHLSERDRRLWGAVATLEERCRRLLRVVAFEERPDYARIAQDLSMPVGSIGPTRGRCLGKLRVALEKDGWSEDTHDL*