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SCNpilot_expt_500_bf_scaffold_9572_2

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(333..767)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1479651 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. CH12i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.9
  • Coverage: 140.0
  • Bit_score: 138
  • Evalue 6.10e-30
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000365439D similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 140.0
  • Bit_score: 113
  • Evalue 1.90e-22
PilT domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 43.9
  • Coverage: 139.0
  • Bit_score: 108
  • Evalue 2.60e-21

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Taxonomy

Microbacterium sp. CH12i → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 435
GTGATCGTCTACTTCGACACTTCCGCGTTCTTCCCGCTGCTGGTCGAGGAAAGCGGGTCTGCGGCGGCGCTTCGCTTGTGGCGCGACTCCACCGCACGCGTGAGCTCACGGTTGATCATCGTCGAAGCGGCGGCGGCCATCGGGATGGGGCTGCGGCTGGGACGCCTCACCGCGGCCGACTACGAACCTGTGCGAGAGGATGCCTGGCGCTACGCCACGAACATGATCCTCGTCGATGTCTCTGCGTCGGTCATCGATGAAGCCGCGGATCTCGCGGTGACGCACTCTTTGCGCGGCTACGACGCGATGCACCTTGCGACGGCGCTTCTGTTCCCTGCGCGTGACCTGGTGTTCGCGTCCGGCGACCGACGCCTTCTCGACGCCGCCGGCGCCGCGGGCTTCACCGTGGTCTACACCGCGCGATCGGGCGCGTGA
PROTEIN sequence
Length: 145
VIVYFDTSAFFPLLVEESGSAAALRLWRDSTARVSSRLIIVEAAAAIGMGLRLGRLTAADYEPVREDAWRYATNMILVDVSASVIDEAADLAVTHSLRGYDAMHLATALLFPARDLVFASGDRRLLDAAGAAGFTVVYTARSGA*