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SCNpilot_expt_500_bf_scaffold_9620_1

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 3..587

Top 3 Functional Annotations

Value Algorithm Source
Ribose ABC transporter substrate-binding protein n=1 Tax=Mobilicoccus pelagius NBRC 104925 RepID=H5UVN9_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 33.9
  • Coverage: 189.0
  • Bit_score: 101
  • Evalue 1.00e-18
Ribose ABC transporter, periplasmic D-ribose-binding protein {ECO:0000313|EMBL:EPJ52212.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbiont Rs2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 176.0
  • Bit_score: 99
  • Evalue 4.20e-18
rbsB; ribose ABC transporter; K10439 ribose transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 179.0
  • Bit_score: 98
  • Evalue 2.10e-18

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Taxonomy

Osedax symbiont Rs2 → Oceanospirillales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 585
GACTCGGCGATCGCGGATTGGGGCGGCTCGATCGCAGAGATCCAGACGGACAACGTTCAGGCCGGCTCCGACGCGATAGACCTGCTCGTCGAGGGCCTGGACGGGAAGGACGTCAACGCGATCATCATCAACAACACGCTCGGATACAAATCCGTGGATGACCGCACCGAGGGAGCCAAGGCGGCGATCGAGGCGGCTGGAGCCACCCTCGTGCAGGTCGTCGATGGCGGAGTCTCGCAGGCCGAGGCTCAGTCGAACGTCGAGACCGTCCTGCGCGCACACCCGGAGATCAACGCGATCATGGGAACCGTATCCGTGTACGCGCTCGGAGGCATGCAAGCACTGCGCACTGCCGGGGTGGACGACGGCTCCGTTCTCGTCACCGGTGTCGACGGCTCTGACGCCGAGTTCGAGGCGATCGAGGCCGGCACCTACTACGGCACGGCCGCGCAGCAGCCTGCCGAAATGGGACGCATGGGCCTGCAGGCGATCCTCGACTCCCTCGACGGCAAGGACGTGGAGGCCTCGATCCTGGTTCCGCCGGTCAAGGTGACCGCCGCGAACGTCGCAGAGTTCCTCAAGTGA
PROTEIN sequence
Length: 195
DSAIADWGGSIAEIQTDNVQAGSDAIDLLVEGLDGKDVNAIIINNTLGYKSVDDRTEGAKAAIEAAGATLVQVVDGGVSQAEAQSNVETVLRAHPEINAIMGTVSVYALGGMQALRTAGVDDGSVLVTGVDGSDAEFEAIEAGTYYGTAAQQPAEMGRMGLQAILDSLDGKDVEASILVPPVKVTAANVAEFLK*