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SCNpilot_expt_500_bf_scaffold_11231_4

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(1865..2791)

Top 3 Functional Annotations

Value Algorithm Source
16S rRNA uridine-516 pseudouridylate synthase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E3Q6_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 63.0
  • Coverage: 311.0
  • Bit_score: 377
  • Evalue 1.50e-101
  • rbh
16S rRNA pseudouridylate synthase {ECO:0000313|EMBL:KIC59155.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.5
  • Coverage: 312.0
  • Bit_score: 380
  • Evalue 2.60e-102
16S rRNA uridine-516 pseudouridylate synthase similarity KEGG
DB: KEGG
  • Identity: 52.3
  • Coverage: 321.0
  • Bit_score: 286
  • Evalue 8.60e-75

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Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGCCCCGTCTCCCGTTCCGTTCTGCCACGCCCGCGCTTCTGACCGCAGGCCTGATCGTCGGGATGGTCGCCACGACCGGCGCCGCCGTCCCCGCCTTCGCCCAGCAGACCGACACCTCCGCGTCGTCGACCGTCGGTGCCATCTCGGCGCCGCTGAGCACCATCACCGCCGACGCGCAGACCACGCTCGCCGACGCCAAGGATGCCCTCGCCGCCGCGCGTCAGGTGACCGTCGACATCCGCACGTCGGGCCTCGACATCGCCTCGAGCACGACCGTCGTCGACACGAGCGCCCTGTCGCAGGTCATCGACGAACTGGACGGGATCGACCTGACCCCCACGCTGCTGCTGCCCGCGCTGACCGCTGATGCGGCCGCCGAGGTGCAGAGCGTGCGCGAGGGCACCGCCGCGCTGCGCGGCCAACTCGACGCCGCGATCGCGAAGAAGGCAGAAGAGGAAGCGGCCGCGAAGGCTGCCGCCGAAGCCGCTGCTGCGCAGGCTGCCGCCGAGGCCGCTGCCGCGCAGGCCGCCGCTGAGGCCGAGGCTGCCGCCGCTGCCGAAGCCGCTGCCGCGCAGTCGACGGCCACGGCATCCGCCCCGGCTGTCAACGTGAACGTCGACCCCGCGTCGGCGCAGGGCATCGCCCGCGACATGATGGCCGCCAACTACGGCTGGGGCGACGACCAGTTCGCGTGCCTCGTGGCGCTGTGGAACAGGGAGTCCGGCTGGAACGTGTCGGCCTACAACGCGTCCAGCGGCGCGTACGGCATCCCGCAGGCTCTCCCCGGCAGCAAGATGGCCTCGGCCGGCGCCGACTGGCAGACCAACCCGGCCACGCAGATCGCGTGGGGCCTGGGTTACATCTCGGGTCGCTACGGCACCGCCTGCGGCGCGTGGGACCACTCGCAGTCGACCGGCTGGTACTGA
PROTEIN sequence
Length: 309
MPRLPFRSATPALLTAGLIVGMVATTGAAVPAFAQQTDTSASSTVGAISAPLSTITADAQTTLADAKDALAAARQVTVDIRTSGLDIASSTTVVDTSALSQVIDELDGIDLTPTLLLPALTADAAAEVQSVREGTAALRGQLDAAIAKKAEEEAAAKAAAEAAAAQAAAEAAAAQAAAEAEAAAAAEAAAAQSTATASAPAVNVNVDPASAQGIARDMMAANYGWGDDQFACLVALWNRESGWNVSAYNASSGAYGIPQALPGSKMASAGADWQTNPATQIAWGLGYISGRYGTACGAWDHSQSTGWY*