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SCNpilot_expt_500_bf_scaffold_10032_9

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(5727..6335)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035C5436 similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 191.0
  • Bit_score: 269
  • Evalue 2.30e-69
RNA polymerase sigma70 factor {ECO:0000313|EMBL:EXJ51356.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 202.0
  • Bit_score: 397
  • Evalue 1.30e-107
RNA polymerase sigma (70) factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 190.0
  • Bit_score: 194
  • Evalue 3.80e-47

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Taxonomy

Microbacterium sp. MRS-1 → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGAGCAATACAGACGTGAGCACAGACAACGAGGTGATCGAACGTTCGGCGGATGAGCCGGGTGCGTTCGCGTTGCTCTTCGATCGACATGCGCCGGCGATCTACCGCTACGCGGCGCAGCGGCTGGGAGAGGGCAGCGCCGAGGACGTGATGTCGGAGACGTTCCTCGTCGCCTTCGAGAAGAGAGCCGCATACGACCTCGCGATCGTCGATGCTCGCCCCTGGCTGTTCGGGATCGCCACCCGCTTGATGCATAAGCATGTGCGGCTGGAAGCGCGGGCATGGAAGGGCATGGTCGCGGATCTCGCGGCGCAGCTCTCGCCCGACATGATCGAGCAGGCGGGCGCGCGGTTGGACGCGGCACGGCTCACGCGGCGCTTGGCTTCGGCGCTGCGTGGCCTGCCCGCGTCCGACCGCGACACCCTGCTGCTGTACGCCTGGGGCGACCTCGACTACGCGGGCATCGCACGCGCTCTCGACGTGCCGATCGGCACCGTCCGCTCACGCCTGAATCGTGCCCGCCGCATCCTGCGGACCGCGGCGGGCACCAACGATCCCGAACTGGAGAAGGAACATGGACGAGTTGACGCTGCTGCGCAACACGCGTAG
PROTEIN sequence
Length: 203
MSNTDVSTDNEVIERSADEPGAFALLFDRHAPAIYRYAAQRLGEGSAEDVMSETFLVAFEKRAAYDLAIVDARPWLFGIATRLMHKHVRLEARAWKGMVADLAAQLSPDMIEQAGARLDAARLTRRLASALRGLPASDRDTLLLYAWGDLDYAGIARALDVPIGTVRSRLNRARRILRTAAGTNDPELEKEHGRVDAAAQHA*