ggKbase home page

SCNpilot_expt_500_bf_scaffold_18245_3

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: comp(2009..2575)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Bifidobacterium angulatum DSM 20098 = JCM 7096 RepID=C4FE68_9BIFI similarity UNIREF
DB: UNIREF100
  • Identity: 30.7
  • Coverage: 192.0
  • Bit_score: 95
  • Evalue 7.20e-17
Putative pilus assembly protein, PilO {ECO:0000313|EMBL:KFI90572.1}; TaxID=78346 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium ruminantium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 32.1
  • Coverage: 190.0
  • Bit_score: 103
  • Evalue 3.70e-19

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bifidobacterium ruminantium → Bifidobacterium → Bifidobacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGACAAGCACAGACTGAGCCTCATCGTCATCGGCATCCTCGCCGTGGCGATCGTCGCGGGCGGCTGGTTCGTCGGCATCCAGCCGCAACTGGACCGTATGAGCACCGCGAACTCGCAGACCCAATCCATCGCACAGTTGAACGACGTGCAACAGCTCGCGATCGATGCACTCGCCGCCGAGAACGAGCATCTCGACCAGTACAAGGCCGACCTCTCCGAAGAGCACAAGCGCATCCCCGCGTCGCGCTCGCAACAAGAGCTCATCAACCAGATCGACGCCGCCGCGACGGCGGCGGGCGTGACGGTGCGAACGCTCCGCTTCGACGCGGCGACCGAGTATGTCGCACCCGAAGGCGTCGATGTCACCCCGCCCTCCAGTGGCCGACTCGTCGCCATCCCGATGACGCTGACGGCGGACGGTGATCGTGCGCAACTGGAGGCGTTCGTCGGCAGTCTGCAGCAGTCCGACCGCATCGTCACCATCTCGGGCAGCCGGTACAGCTCCGGCGATGTCGACTCGATCGAGCTCACCGGCACGACCTGGGTGCTGATCCCGACGGCGTAG
PROTEIN sequence
Length: 189
MDKHRLSLIVIGILAVAIVAGGWFVGIQPQLDRMSTANSQTQSIAQLNDVQQLAIDALAAENEHLDQYKADLSEEHKRIPASRSQQELINQIDAAATAAGVTVRTLRFDAATEYVAPEGVDVTPPSSGRLVAIPMTLTADGDRAQLEAFVGSLQQSDRIVTISGSRYSSGDVDSIELTGTTWVLIPTA*