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SCNpilot_expt_500_bf_scaffold_17147_5

Organism: SCNpilot_P_inoc_Microbacterium_69_20

partial RP 11 / 55 BSCG 15 / 51 MC: 1 ASCG 9 / 38 MC: 1
Location: 3157..3648

Top 3 Functional Annotations

Value Algorithm Source
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.9
  • Coverage: 163.0
  • Bit_score: 291
  • Evalue 6.30e-76
N-formylmethionyl-tRNA deformylase; K01462 peptide deformylase [EC:3.5.1.88] similarity KEGG
DB: KEGG
  • Identity: 79.1
  • Coverage: 163.0
  • Bit_score: 269
  • Evalue 9.90e-70
peptide deformylase n=1 Tax=Microbacterium barkeri RepID=UPI0002FFAB50 similarity UNIREF
DB: UNIREF100
  • Identity: 85.9
  • Coverage: 163.0
  • Bit_score: 294
  • Evalue 5.30e-77

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Taxonomy

Microbacterium azadirachtae → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 492
ATGGCCGTCCGCACGATCCGCCTCTTCGGCGACCCTGTGCTGCGCGCCGTGTGCGCGCCGATCGACGAGATCGACGACGGCGTGCGCTCACTCGTGCAAGACCTCGTCGACACGGTCGAGCTGCCCGGGCGGGCCGGCGTCGCGGCGCCGCAGATCGGCTTCGCGCTGCGCGCGTTCAGCTACAACATCGACGGCGACATCGGCTACATCCTCAACCCCGTGCTGGCGGAAGTGCGCGGCGAGCCCGTGCCCGTCGGCGAGGGATGCCTCTCGGTGCCAGGCCTGTGGCACGACGCCCTGCGGCATCCGTGGGCGCGTGTCACCGGCATCGACCTGAACGGTGACGAGGTCGTCTTGGAGGGCGATGGCCTGCTCGCCCAAGCCCTGCAGCACGAGACCGACCACCTCGACGGGATGCTCTACCTCTCCCGCCTGAGCCCCGACGACCGCCGCGTGGCGATGCGCGAGGTCCGCGAGTCCAGCTGGTTCTGA
PROTEIN sequence
Length: 164
MAVRTIRLFGDPVLRAVCAPIDEIDDGVRSLVQDLVDTVELPGRAGVAAPQIGFALRAFSYNIDGDIGYILNPVLAEVRGEPVPVGEGCLSVPGLWHDALRHPWARVTGIDLNGDEVVLEGDGLLAQALQHETDHLDGMLYLSRLSPDDRRVAMREVRESSWF*