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SCNpilot_expt_500_bf_scaffold_1234_2

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(535..1203)

Top 3 Functional Annotations

Value Algorithm Source
Polar amino acid ABC transporter, inner membrane subunit n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3H4_ACIAP similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 222.0
  • Bit_score: 380
  • Evalue 1.00e-102
polar amino acid ABC transporter permease; K10002 glutamate/aspartate transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 222.0
  • Bit_score: 380
  • Evalue 3.20e-103
Polar amino acid ABC transporter, inner membrane subunit {ECO:0000313|EMBL:ADX47876.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.3
  • Coverage: 222.0
  • Bit_score: 380
  • Evalue 1.40e-102

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Taxonomy

Acidovorax avenae → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCTGAACCTCGACTTTTCGATCTTCACCTGGTCGCTGGTCCAGAACTTCATCGTCAAGGGCTTCATCTTCAGCCTGACGCTGACGGCGATCGCCACCCTGGGCGGCGTGTTCTTCGGCACGCTGCTGGCGCTGATGCGGCTGTCGGGCCAGAAGTGGCTGGATCTGCCGGCGGCGTTCTACGTCAACGCGATGCGCTCGGTGCCGCTGGTGATGGTGATCCTGTGGTTCTTCCTGCTGGTGCCGCTGATCATCGGCCAGCCGATCGGGGCCGAATACTCGGCCGTCATCACCTTCATCGCCTTCGAGGCCGCCTACTTCAGCGAGATCATGCGCGCCGGCATCCAGTCCATCCCGCGCGGGCAGGTGTTTGCCGGCCAGGCGCTGGGCATGACCTATGGCCAGAACATGAAGCTGGTGATCCTGCCGCAGGCGTTTCGCAACATGCTGCCGGTGCTGCTGACGCAGACCATCATTCTGTTCCAGGACACCTCGCTGGTGTATGCCATCGGCGCCTACGACCTGCTCAAGGGTTTCGAGACTGCGGGCAAGAACTTCGGCCGTCCGATCGAGATGTACCTGCTGGCGGCGGTGGTCTATTTCATCATCAGTTTCTCGCTCTCGTCGGTGGTCAAGCGCATCCACCGCAAGATCGCCATCATTCGCTGA
PROTEIN sequence
Length: 223
MLNLDFSIFTWSLVQNFIVKGFIFSLTLTAIATLGGVFFGTLLALMRLSGQKWLDLPAAFYVNAMRSVPLVMVILWFFLLVPLIIGQPIGAEYSAVITFIAFEAAYFSEIMRAGIQSIPRGQVFAGQALGMTYGQNMKLVILPQAFRNMLPVLLTQTIILFQDTSLVYAIGAYDLLKGFETAGKNFGRPIEMYLLAAVVYFIISFSLSSVVKRIHRKIAIIR*