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SCNpilot_expt_500_bf_scaffold_2254_21

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: 21061..22383

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Acidovorax sp. CF316 RepID=J0KMR6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 52.5
  • Coverage: 463.0
  • Bit_score: 412
  • Evalue 4.70e-112
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EJE54905.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 463.0
  • Bit_score: 412
  • Evalue 6.60e-112
periplasmic linker protein similarity KEGG
DB: KEGG
  • Identity: 51.3
  • Coverage: 437.0
  • Bit_score: 399
  • Evalue 1.00e-108

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Taxonomy

Acidovorax sp. CF316 → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1323
GTGGCTAGGCGCCCCCTGGTGTCGATCATCGCCATCGGCGCCCTGCTGGCGCTGTCTGCCGGCGCCTGGTGGTGGCAGCGCGGCGGCGGCGCCACCGGCGCGGGCCCGCAACCGGCGGCCAGCGCGCCACGTGGCGCCGGCGGGCCGGGCGCAGGCAAAGGCCCTGGCGCCGGCGGCGGCGCGCCGCCGCCGGTGGTCGAGCTGGCGCCGGCGCGCGCCATGACGCTGCGCGACGCGGCCAGCGCCGTCGGCAGCCTGCGTTCGCGCCAGAGCGTGGTGCTGCGGCCCGAAGTGGCCGGGCGCGTGACGCTACTGAACTTCCGCGATGGCGAGCGCGTGCGCCGCGGCCAACTGCTGGTGCAGCTGGACGACCGGCTGGCGCTGGCGCAGGTGCAGCAGGCGCGCGCCGAGCTGGGCATTGCCGAATCCAACCACCGGCGCAACGCCGACCTGGCGGGGCAGGGCTTCATCAGCGCCCGCGCGGTGGACGAAAGCCAGGCCGCCGTGGCCGTGGCGCGCGCCAAGCTGGAGCTGGCCCAGGCGACCGCCGCGCGGCTGAAGATCCTGGCGCCCTTCGGCGGCCTGGCCGGCATCGGCAACGTGCACGTGGGCGACGTGCTGCAGGCTGGCGCCGAGATCGTGCACCTGGACGATCTGGACGCCATGCTGCTGGACTTTCGCCTGCCCGAGCGCTGGCAGACCCGCGTGCGGCGCGGCCAGGTCAGCCACGTGACGCTGGACGCGCTGCCCGGCCACGCCTTCGAGGCCGTGATCCAGGCCATCGACCCGCAGATCGACGCCCAGGGCCGCAGCGTGGCCGTGCGCGCCTGCATCGACAACCGCGAGGGCTTGCTGCGCCCCGGTATGTTCGCCCGCGTGGACACGGCGTTTGGCGAGCGTCCCGGCGCCGTCATGCTGCCCGAGGAAGCCGTGCTGTCGCAGGGCGGCAACCTGTACGTGTACCGGCTGGCCGCTGCGCCGGCCCAGGGCGGCCCGGGCCCCGAGGGCACGGCCGAGGTCAGCCGCGTCGAAGTCACCCTGGGCGCGCGCCTGGGCGGCCGGGTCGAGGTGATCAGTGGCGTGGCCGCGGGCGACCGCTTGGTGGTGGCCGGCCAGCAGCGGCTGAACACACCGACGGCGCGCGTGCGCCTGGCCGCCGCCCCCGCCGCCGCTGCCAGCGAGCCAGCCGCCACGGCCAGTGCGCCAGCCGCCACGGCCAGTGCGCCGGCCGGTGCCGCCAGCGCCGGCGCGCCCGCCGCGGCCCTGCGCTGGCACCGCGCCAGCACGGGCGGCAACGCCTGCGCCGTGGCCTCGCGCGGGTAG
PROTEIN sequence
Length: 441
VARRPLVSIIAIGALLALSAGAWWWQRGGGATGAGPQPAASAPRGAGGPGAGKGPGAGGGAPPPVVELAPARAMTLRDAASAVGSLRSRQSVVLRPEVAGRVTLLNFRDGERVRRGQLLVQLDDRLALAQVQQARAELGIAESNHRRNADLAGQGFISARAVDESQAAVAVARAKLELAQATAARLKILAPFGGLAGIGNVHVGDVLQAGAEIVHLDDLDAMLLDFRLPERWQTRVRRGQVSHVTLDALPGHAFEAVIQAIDPQIDAQGRSVAVRACIDNREGLLRPGMFARVDTAFGERPGAVMLPEEAVLSQGGNLYVYRLAAAPAQGGPGPEGTAEVSRVEVTLGARLGGRVEVISGVAAGDRLVVAGQQRLNTPTARVRLAAAPAAAASEPAATASAPAATASAPAGAASAGAPAAALRWHRASTGGNACAVASRG*