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SCNpilot_expt_500_bf_scaffold_7230_2

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 51 / 55 MC: 2 BSCG 50 / 51 MC: 2 ASCG 12 / 38 MC: 1
Location: comp(556..2805)

Top 3 Functional Annotations

Value Algorithm Source
Type II and III secretion system protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12DW3_POLSJ similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 761.0
  • Bit_score: 798
  • Evalue 6.80e-228
  • rbh
type II and III secretion system protein; K02453 general secretion pathway protein D similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 761.0
  • Bit_score: 798
  • Evalue 2.10e-228
  • rbh
Type II and III secretion system protein {ECO:0000313|EMBL:ABE43279.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 761.0
  • Bit_score: 798
  • Evalue 9.50e-228

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Taxonomy

Polaromonas sp. JS666 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2250
ATGCCACGCCTGTCCCGCCGACCCTTGCCGTCCGGCGCGCGCCGCCCGCGCAGACTCCCCGCCCTGCTGCTGGCGCTGGCCGGCGCGCTGCCGCTGGCGCCGTGCCTGGCGCAGCCAGCCGCCGGCGCGCCGGCGGCCAGCGGCGGCAAGGTCACGCTGGACTTCGCCAACGCCGAGATCGACGCCGTGGCGCGCACCATGGCCACGCTGACCGGCCGCAACGTGGTGGTCGACCCACGCGTGCGCGGCACGCTGACGCTGACCAGCACCACGCCGGTCTCGCCCGCCGACGCGCTGCGCCTGTTCGGCGCCCAGCTGCGCACGCAGGGCTTCGCGCTGGTCGACAACGCCGGCATGGTGCTGGTGCTGCCCGAGGGCGAGGCCAAGCTGCAGGGCGGCGCGGTGTCGGCCGGCGCGGTGCGCGGCGGCGGCCAGATCCAGACCCAGATCTTCCGCCTGACGCACGAGAACGCCAACAACCTGGTGCCCATCCTGCGGCCGCTGATCAGCCCCAACAACACCATCAACGTCGGGCCCGGCACCAATGCGCTGGTGATCACCGACTACGGCGACAACCTGCAGCGGCTGGGCCGCATCATCGCCGCGCTGGACGTGTCCAGCGCCACCGGGGTCGAGGTGGTGCGCCTGCAGCACGCCGTGGCCTCCGACCTGGCGCCGCTGGTGGCGCGGCTGCTCGAATCCGGTGGCGGCGGCGCGGCCGCCGCCGCGCCGGTGCCGGGCCAGCCCGGCCTGCCGGCCACGGCCACCCTGGGCGGCGGCGACGGCGGCTATCGCACCACCCTGGTGCCCGAGCCGCGCAGCAACGCCATCGTGGTGCGCGCCGCCAACCCGGCGCGGCTGGCGCTGGCGCGCACCCTGATCGAACAGCTCGACCAGCCGCCGGCGCGCCGGCCCGACGGCGGCAGCGGCAACATCCATGTGGTGTACCTGAAGAACGCCGACGCCGCCAAGCTGGCCGTCACCCTGCGCGCCGCGCTGGCGGCGCTGCCCGGCCAGTCGGCCGCGGCAGGCGCCGCAGGCGCCGGCCCGGGCGCCGCCAACCCGCTGGGCCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGACCATCGACGCCGGCGCCAGCAACCAGCCGTCCACCGGCGGGCAGATCCAGGCCGACCCGGCCACCAATTCGCTCATCATCAGCGCGCCCGAGCCGATCTACCGCGAGCTGCGCGCGGTGATCGACAAGCTGGACCAGCGCCGCGCCCAGGTCTACGTGGAAAGCCTGATCGCCGAGGTGCGCGCCGACAAGGCGGCCGAATTCGGCATCCAGTGGCAGGCCGTGCTGGGCAACAAGGGCGACACCAACATCGGCGTGCTGGGCACCAACTTCGGCACCACCGCGGCCGGCACACCGGGCCTGGGCAACATCCTGAGCGTCAGCCCCGGCATGAGCGATCTGGTGAGCAACCAGACATTCCCCAGCAGCCTGCCGATCCGCGAGGGCTTCAACTTCGGGCTGATGCACCGCTTCGGCGCCGGCTACCTGCTGAGCGCCCTGGCCAACTTCATCCAGTCCACCGGCTCGGGCAACGTGCTGTCCACGCCCACCCTGCTGACGCTGGACAACGAGGAGGCGCGCATCGTCGTCGGCCAGAACGTGCCCTTCGTCACCGGCAGCTACACCAACACCGGCAGCACCACCAACGCCGTCAACCCGTTCCAGACCTTCGAGCGCAAGGACGTCGGCCTGACGCTGCGCGTGCGCCCGCAGATCAGCGAGGACGGCACCATCAAGATGGTGATCTACCAGGAAACCTCCAGCGTGGTGGCCAGCACGGTCGGCTCCTCGCAGGGCCCCATCACCAACAAGCGCGCCATCGAATCCAGCGTGCTGGTCGGCGACGGCGCGGTGGTGGTGCTGGGCGGCCTGCTGGAAGACCAGTTCGCCACCAGCGAGGACAAGCTGCCCGGCCTGGGCGACATCCCGGTGCTGGGCAACCTGTTCAAGAACCAGAACCGCAGCTACGTCAAGACCAACCTGATGGTGTTCCTGCGGCCGGTGATCGTGCGCGACGGCGCGGCGGCCGAGTCGTTCTCGCTCGACCGCTACGACTACATGCGCGCCGCGCAGTCGGCCAACCAGCCGCAGGCCAGCAGCGTGCTGCAGATCAACGCGCCGCCGCTGATCCGCCCGCCGGCCGCCGGCGAAAACAGCGACCCCGGCAGCGGCACCACCTTCACGCGGCCGTAA
PROTEIN sequence
Length: 750
MPRLSRRPLPSGARRPRRLPALLLALAGALPLAPCLAQPAAGAPAASGGKVTLDFANAEIDAVARTMATLTGRNVVVDPRVRGTLTLTSTTPVSPADALRLFGAQLRTQGFALVDNAGMVLVLPEGEAKLQGGAVSAGAVRGGGQIQTQIFRLTHENANNLVPILRPLISPNNTINVGPGTNALVITDYGDNLQRLGRIIAALDVSSATGVEVVRLQHAVASDLAPLVARLLESGGGGAAAAAPVPGQPGLPATATLGGGDGGYRTTLVPEPRSNAIVVRAANPARLALARTLIEQLDQPPARRPDGGSGNIHVVYLKNADAAKLAVTLRAALAALPGQSAAAGAAGAGPGAANPLGQXXXXXXXXXXXXXXTIDAGASNQPSTGGQIQADPATNSLIISAPEPIYRELRAVIDKLDQRRAQVYVESLIAEVRADKAAEFGIQWQAVLGNKGDTNIGVLGTNFGTTAAGTPGLGNILSVSPGMSDLVSNQTFPSSLPIREGFNFGLMHRFGAGYLLSALANFIQSTGSGNVLSTPTLLTLDNEEARIVVGQNVPFVTGSYTNTGSTTNAVNPFQTFERKDVGLTLRVRPQISEDGTIKMVIYQETSSVVASTVGSSQGPITNKRAIESSVLVGDGAVVVLGGLLEDQFATSEDKLPGLGDIPVLGNLFKNQNRSYVKTNLMVFLRPVIVRDGAAAESFSLDRYDYMRAAQSANQPQASSVLQINAPPLIRPPAAGENSDPGSGTTFTRP*