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SCNpilot_expt_500_bf_scaffold_2638_11

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 11796..12218

Top 3 Functional Annotations

Value Algorithm Source
flagellar basal-body rod protein FlgC n=1 Tax=Sphingomonas elodea RepID=UPI0002631384 similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 141.0
  • Bit_score: 230
  • Evalue 8.10e-58
Flagellar basal-body rod protein FlgC {ECO:0000256|RuleBase:RU362062}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 142.0
  • Bit_score: 158
  • Evalue 7.20e-36
flagellar basal-body rod protein FlgC; K02388 flagellar basal-body rod protein FlgC similarity KEGG
DB: KEGG
  • Identity: 40.3
  • Coverage: 144.0
  • Bit_score: 109
  • Evalue 1.10e-21

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Taxonomy

Sphingomonas sanxanigenens → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 423
ATGGACGCCATCGCCATCAGCCGCACCGGCCTAGACGTCGAGTGGCAGCGCCTTCAGGTGATCGCGCAGAACCTCGCCAACATCAACACGAGCCGCACCGCTTCCGGCCAGCCGTTCCACCCGCTGCGCCTGTTGTCGGGGCCGCAAGTCGATTTCAAGCATCTCGTGCGGGCGGGCGACAAGACGCCCGGCGGCGTCGAGGTGCTCGGCGTCGAGCCGATGGCGGCGGGCACGCGCCGGGTCTACGAGCCCGGCCATCCGCATGCCGACGCCGATGGCTTCGTCACCTATCCCGATGTCGACCATGCATCCGAGATGACGCTGCTGATCAAGACGTCGCGCGCCTATGAGGCCAATCTCACGGCGATGAGCATCGCGCAGCAAATGTATTCGCGCGCCGCCGAACTGGGCAAGCAGGCATGA
PROTEIN sequence
Length: 141
MDAIAISRTGLDVEWQRLQVIAQNLANINTSRTASGQPFHPLRLLSGPQVDFKHLVRAGDKTPGGVEVLGVEPMAAGTRRVYEPGHPHADADGFVTYPDVDHASEMTLLIKTSRAYEANLTAMSIAQQMYSRAAELGKQA*