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SCNpilot_expt_500_bf_scaffold_3307_17

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 15565..16233

Top 3 Functional Annotations

Value Algorithm Source
short chain dehydrogenase (EC:1.1.1.-) similarity KEGG
DB: KEGG
  • Identity: 48.5
  • Coverage: 204.0
  • Bit_score: 156
  • Evalue 1.30e-35
short-chain dehydrogenase n=1 Tax=Sphingomonas elodea RepID=UPI0002631D9B similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 204.0
  • Bit_score: 254
  • Evalue 1.10e-64
Short-chain dehydrogenase {ECO:0000313|EMBL:AJP72342.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 201.0
  • Bit_score: 278
  • Evalue 9.90e-72

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGCCGTGGCGATCCACCATCACCATGCCCCCGGCGAGGCCGCGGCGCTGCGCGCGCAGATCGGTAGTGAGCGGCGAACTGGCCGAGGCGGAGACCGCCCCCGCATTGATCGCGGCGGCGCGGAACGGGCTGGGCGGTGCGGTGGAGGGGCTGGTCAACAACGCGTCCCAATTCGCCTGGGACGCCCTGCCCCTCACCGATTTCGCGCTGCTCGACCGGCACATGCGCGTCAATTGCGGCGCTCCCGTCGCGCTCGCCTCGGCGCTGGCGGCGCAGGACGATCTCGATGAGGGCGCCGTGGTCAACCTGCTCGACCAGAAGCTCGCCAACCTCAATCCCGATTTCCTGACCTACACGCTCAGCAAGGCAGCGCTCGCCACTGCGACCGAACTGCTCGCCCGCGGCCTCGCGCCGCGCATCCGGGTGAACGCGGTCTCGCCGGGCCTCACGCTCCCCAGCCTCGACCAGACCGCCGAGGAATTCGCCGGGCATGCCCGCCAGAACCTGCTCCAGCGCCCCGTCGCGCTGGCCGACATCGCCGCCACGGTCGAGCATCTGCTCACCGCCCGGAGCATCACCGGCCAGAATGTCTTCGTCGATTGCGGCCAGCGCTTCCTGCAGCGCGACGGCGACGTGATGTTCGAGGGGCGGAAGCGCCCGCATGGCTGA
PROTEIN sequence
Length: 223
MPWRSTITMPPARPRRCARRSVVSGELAEAETAPALIAAARNGLGGAVEGLVNNASQFAWDALPLTDFALLDRHMRVNCGAPVALASALAAQDDLDEGAVVNLLDQKLANLNPDFLTYTLSKAALATATELLARGLAPRIRVNAVSPGLTLPSLDQTAEEFAGHARQNLLQRPVALADIAATVEHLLTARSITGQNVFVDCGQRFLQRDGDVMFEGRKRPHG*