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SCNpilot_expt_500_bf_scaffold_3307_22

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(19298..20902)

Top 3 Functional Annotations

Value Algorithm Source
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000313|EMBL:AJP72345.1}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_00572}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 552.0
  • Bit_score: 956
  • Evalue 2.00e-275
leuA; 2-isopropylmalate synthase (EC:2.3.3.13); K01649 2-isopropylmalate synthase [EC:2.3.3.13] similarity KEGG
DB: KEGG
  • Identity: 77.8
  • Coverage: 550.0
  • Bit_score: 878
  • Evalue 1.50e-252
  • rbh
2-isopropylmalate synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002F9C357 similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 552.0
  • Bit_score: 984
  • Evalue 4.80e-284
  • rbh

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1605
ATGCTGCGCGATCCGAGTATCAAATATCGTCCGTTCCCCCAGGTAAACCTGCCCGGCCGCCAATGGCCGAGCCGCACCATCACCAAGGCGCCCCGCTGGCTGTCGACCGACATGCGCGACGGCAACCAGGCGCTGATCGACCCGATGGATGCCGAGAAGAAGACCCGCTTCTTCGAGCTGCTCTGCAAGGTGGGCGTGAAGGAGATCGAAGTCGGCTTTCCGAGCGCGGGTGCCACCGAGTTCGATTTCATCTCGAGCCTGGTCCGGCAGGACAGGATCCCCGACGACGTGATCGTCCAGGTGCTCACCCAGTCGCGCCAGGACCTGATCGAGACCAGCTTCCAGAGCCTGAAGGGCGCGAAACAGGCGATCGTTCATCTCTACAATGCCGTCTCGCCGGCATGGCGCCGCATCGTGTTCGGCATGAGCCGCGAGGAGATCAAGGGCATCGCGATCGCCGGCGCCAAGGTGCTGCGCGACGAGGCCGCCAAGCAGCCCGATACCGACTGGCATTTCGAGTATAGCCCGGAGACCTTCTCGACCGCCGAGCTCGATTTCTCGGTCGAGGTCTGCGAGGCAGTGATGGACATCCTGCGCCCGACCACCGAGCGCCCGCTGATCCTCAACCTGCCGGCCACGGTCGAGGCGGCGACGCCCAACATATATGCCGACCAGATCGAGTGGTTCTGCCGAAACATCCGAAGCCGCGAGACGGTGGTGATCAGCCTGCACACCCACAATGATCGCGGCACCGGCGTCGCCGCGTCCGAACTGGGGCTGCTGGCGGGCGCGGACCGTGTCGAGGGCTGCCTGTTCGGAAACGGCGAGCGCACCGGCAATGTCGACATCGTCACGCTGGCGCTCAACATGTACACGCAAGGCGTTGATCCGGGGCTGGATTTCTCGAACATCGACGAGGTGATCCAGACAGTCGAATATTGCAATCAGATCCCCGTCCATCCGCGGCATCCCTATGCGGGCGACCTGGTGTTCACGGCATTCTCCGGTAGCCATCAGGACGCGATCAAAAAGGGTTTCGCCGCGCAGGAAGCGCGCAACGACGAGATCTGGGACGTGCCCTATCTGCCGATCGATCCCAAGGATCTGGGGCGCGATTACGAGGCGGTGATCCGGGTCAACTCGCAATCGGGCAAGGGTGGCGTCGCCTGGGTGCTCGAGCAGGACAAGGGGCTGAAGCTCCCCAAGCGGATGCAGGCCGATTTCTCGCGTCACGTCCAGGCGCTGGCCGACGAGACCAGCCGCGAGCTCAATGCCGCCGACATCTGGGGCCGCTTCGAGCAGACCTATCTGCCGGGCGCCGGCGATCGCTTCGCGCTGGTCGATTACGAGGAGACCGGCGCCGCCGGGCAGCGCGTGTTCGTCGGCCGCATCGCGGTGGACGGGGAGGCGCGCTCGATCTCCGGCCGCGGCAACGGCCTCGTCGACTATAGCGAGCATGCGATCGGCCATGGTGCCGATGCGCAGGCGGCCGCCTATGTCGAATGCCGTACCGCCGAGGGGCGCACGGTGTTCGGCGTAGGCATCGATGCCGACATCGCGACGGCTTCGGTGCGCGCGGTGCTAAGCGCGGCGAACCGGGCCTGA
PROTEIN sequence
Length: 535
MLRDPSIKYRPFPQVNLPGRQWPSRTITKAPRWLSTDMRDGNQALIDPMDAEKKTRFFELLCKVGVKEIEVGFPSAGATEFDFISSLVRQDRIPDDVIVQVLTQSRQDLIETSFQSLKGAKQAIVHLYNAVSPAWRRIVFGMSREEIKGIAIAGAKVLRDEAAKQPDTDWHFEYSPETFSTAELDFSVEVCEAVMDILRPTTERPLILNLPATVEAATPNIYADQIEWFCRNIRSRETVVISLHTHNDRGTGVAASELGLLAGADRVEGCLFGNGERTGNVDIVTLALNMYTQGVDPGLDFSNIDEVIQTVEYCNQIPVHPRHPYAGDLVFTAFSGSHQDAIKKGFAAQEARNDEIWDVPYLPIDPKDLGRDYEAVIRVNSQSGKGGVAWVLEQDKGLKLPKRMQADFSRHVQALADETSRELNAADIWGRFEQTYLPGAGDRFALVDYEETGAAGQRVFVGRIAVDGEARSISGRGNGLVDYSEHAIGHGADAQAAAYVECRTAEGRTVFGVGIDADIATASVRAVLSAANRA*