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SCNpilot_expt_500_bf_scaffold_3307_24

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 21575..21832

Top 3 Functional Annotations

Value Algorithm Source
SWIB/MDM2 domain-containing protein n=1 Tax=Sphingomonas RepID=UPI000263212F similarity UNIREF
DB: UNIREF100
  • Identity: 89.4
  • Coverage: 85.0
  • Bit_score: 161
  • Evalue 3.70e-37
Uncharacterized protein {ECO:0000313|EMBL:AJP72347.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 85.0
  • Bit_score: 151
  • Evalue 5.40e-34
SWIB-domain-containing protein implicated in chromatin remodeling similarity KEGG
DB: KEGG
  • Identity: 66.3
  • Coverage: 86.0
  • Bit_score: 118
  • Evalue 1.10e-24

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCCGAGACCAAAGCACGCGGCGGTATCGCCAAGCCGGTGACCCCTTCGCCCGAGCTGGCCAAGATCACCGGCTCCGCGGACCTTCCGCGCAGCGAAGTCGTCAGCAAGCTGTGGGACTATATCAAGAAGAACAACCTGCAGAACCCGGCGAACAAGCGCGAGATCCTCGCCGATGACACGCTGCGTCCGATCTTCGGCACCGACAAGGTGACGATGTTCGAGATGAACAAGCACATCGCGAAGCACGTCAAGTAA
PROTEIN sequence
Length: 86
MAETKARGGIAKPVTPSPELAKITGSADLPRSEVVSKLWDYIKKNNLQNPANKREILADDTLRPIFGTDKVTMFEMNKHIAKHVK*