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SCNpilot_expt_500_bf_scaffold_5122_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 7176..7553

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator Xre family n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I7Z1_GLUXN similarity UNIREF
DB: UNIREF100
  • Identity: 64.3
  • Coverage: 126.0
  • Bit_score: 153
  • Evalue 1.10e-34
XRE family transcriptional regulator {ECO:0000313|EMBL:AJP74181.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 125.0
  • Bit_score: 200
  • Evalue 1.90e-48
Xre family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 64.3
  • Coverage: 126.0
  • Bit_score: 153
  • Evalue 3.60e-35

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGTCTTCGGCAAAAACCCGGTCGGTCTTGATTCGGCTCGGCAAGGATCTGCGGGCCGCGCGCCTTCGCCGCGGCATGGCGATCGGCGACCTTGCCGTGCGCGCCGGCGCTTCGACCAGCACGATTATCCGGATGGAAAAAGGGGAACCGGGAGTCGGGATCGGCACGCTCGCCGACGTCATGGTCGTGTTCGGTCTCAATGAACGTTTCGCCGACCTGCTCGATGTCCGGCACGACGATCTTGGCCTGGCCCTGAGCAATGAACGGCTTCCGCAACGTGGCCGCCGCCGCTCTACGAAGATTCCTCGCCAGCAAGGCGACAAGGATTCGGCTTCGCCGGAGGGTGGCGACAGCAACGCTGACGGCCTCGCCTTCTGA
PROTEIN sequence
Length: 126
MSSAKTRSVLIRLGKDLRAARLRRGMAIGDLAVRAGASTSTIIRMEKGEPGVGIGTLADVMVVFGLNERFADLLDVRHDDLGLALSNERLPQRGRRRSTKIPRQQGDKDSASPEGGDSNADGLAF*