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SCNpilot_expt_500_bf_scaffold_6316_13

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: 7662..8270

Top 3 Functional Annotations

Value Algorithm Source
Ornithine decarboxylase (EC:4.1.1.17); K01581 ornithine decarboxylase [EC:4.1.1.17] similarity KEGG
DB: KEGG
  • Identity: 73.3
  • Coverage: 202.0
  • Bit_score: 315
  • Evalue 1.50e-83
decarboxylase n=1 Tax=Sphingomonas melonis RepID=UPI00036FED03 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 205.0
  • Bit_score: 349
  • Evalue 1.70e-93
Decarboxylase {ECO:0000313|EMBL:AJP72362.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.4
  • Coverage: 204.0
  • Bit_score: 348
  • Evalue 5.40e-93

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 609
ATGGAGCGCGTGCGCGCGGCGATCGTCGAGTCGGCCGTCACCGTGGACGTGATCGACGTCGGCGGCGGCTTCCCCTCGGTCTATCCGGGCATGACCCCGCCGCCGCTCGAAGCCTATTTCGAGACGATCCACCGCGCGTTCGAGAGCCTGCCGATCTCCTATTCGGCCGAGCTCTGGGCCGAGCCGGGCCGTGCGCTGTGCGCCGAGTACAGTTCGATCGTGGTGCGCGTGGAGCGCCGCCGCGGCGCGGAGCTGTACATCAACGACGGCGCCTATGGCACGCTGTTCGATGCAGCGCACATCGGCTGGAAGTTCCCGGTCGAGCTGCTGCGCGAGCCGGAATCGAACGCCAAGGACGTCGAGTTCAGCTTCTACGGCCCGACCTGCGACGATCTCGACTACATGAAGGGCCCGTTCCTTCTGCCGGCCGACACCCGTTCGGGCGATTATTTCGAGATCGGCATGCTGGGTGCCTATGGCTCGGCGATGCGCACCGCGTTCAACGGCTTCGGCACCGACGCGACCGTCACCGTGACGGACGAGCCGATGGCCTCGATGTATGTCGAGCTTTCGGAACGCCGCCCGGCGTGGAACGTCGTAAAGCTGTAA
PROTEIN sequence
Length: 203
MERVRAAIVESAVTVDVIDVGGGFPSVYPGMTPPPLEAYFETIHRAFESLPISYSAELWAEPGRALCAEYSSIVVRVERRRGAELYINDGAYGTLFDAAHIGWKFPVELLREPESNAKDVEFSFYGPTCDDLDYMKGPFLLPADTRSGDYFEIGMLGAYGSAMRTAFNGFGTDATVTVTDEPMASMYVELSERRPAWNVVKL*