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SCNpilot_expt_500_bf_scaffold_8092_1

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(3..476)

Top 3 Functional Annotations

Value Algorithm Source
methyl-accepting chemotaxis sensory transducer, partial n=1 Tax=Sphingomonas elodea RepID=UPI0002632212 similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 158.0
  • Bit_score: 228
  • Evalue 4.50e-57
Chemotaxis protein {ECO:0000313|EMBL:AJP73824.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.8
  • Coverage: 142.0
  • Bit_score: 223
  • Evalue 2.70e-55

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Taxonomy

Sphingomonas sp. WHSC-8 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
GTGACCAACGCCGTTTCGCTTGAGGATCTGCCGGCACCGGGCTCCACGGCCGCCCGCATCGACGTGCGCGCCCGGCTTCGCATCTTCGATTTCGAAGGCTCGCTCGCCGCTTCGGGCCGCGCCGCCTGGGAAGCGCTGGAGCCGGAGATTCGCGCGGTCTCGGAGGCCTATTGGCAGCAATGGCTGCGCTGCTTCGCCGACGAGCGCAGCTGGGCGCCCGACGATACCCAGAAGATGATCGATCTCGGCGTCGTCTTCCTCAGGAACCGCTTCCTCGACGCCGAGGGCCGCGCCTGGATCGAGTCGATCGAGCGCTCGGTCGCGGCGGCCTATGCCGCGAACGTGCCGCCGATGGCGCTGCTCTCGATGATCAGCGCGAGCGACCGGGTGGCGCTCGAGATACTGATCCGCCGCGTCGGCACCGAGGACCAGCGACTCGCCGGCCTGATCGATACGCTGATGCGGCTCTCCGCG
PROTEIN sequence
Length: 158
VTNAVSLEDLPAPGSTAARIDVRARLRIFDFEGSLAASGRAAWEALEPEIRAVSEAYWQQWLRCFADERSWAPDDTQKMIDLGVVFLRNRFLDAEGRAWIESIERSVAAAYAANVPPMALLSMISASDRVALEILIRRVGTEDQRLAGLIDTLMRLSA