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SCNpilot_expt_500_bf_scaffold_14562_2

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_66_39

near complete RP 50 / 55 BSCG 47 / 51 ASCG 11 / 38 MC: 1
Location: comp(455..1897)

Top 3 Functional Annotations

Value Algorithm Source
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35); K00074 3-hydroxybutyryl-CoA dehydrogenase [EC:1.1.1.157] similarity KEGG
DB: KEGG
  • Identity: 53.9
  • Coverage: 475.0
  • Bit_score: 472
  • Evalue 1.70e-130
  • rbh
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:ABQ67117.1}; EC=1.1.1.35 {ECO:0000313|EMBL:ABQ67117.1};; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 475.0
  • Bit_score: 472
  • Evalue 7.70e-130
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003788FF6 similarity UNIREF
DB: UNIREF100
  • Identity: 83.3
  • Coverage: 480.0
  • Bit_score: 787
  • Evalue 7.70e-225
  • rbh

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Taxonomy

Sphingomonas wittichii → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1443
ATGAACAGGAAGGTTGCGGTCATCGGCGCGGGCACGATGGGAAGCGGTATAGGCCAGGTAGCCGCGACGGCGGGGCATGAGGTGGTAGTGATTGACCGCGACGCGAGCGCTCTCGATCGCGGTCGGCAGCTCCTCGCAAAGTCGATCGGTGCGCTGGTCGCGCGCTCGCGGCTCGATCGGGACGATGCCGACACCATCGTAGCACGTATTGGCTGGTCGCAGGAGCTGGGCGATGCCGCGGACGCGGGCCTGATCATCGAGGCCGTGCTCGAAGACCTCGATGTCAAGCACAGGCTCTTCGCGGACCTCGGCGCGCTTGCCGCGCGTGACGCCATCGTCGCCAGCAACACCTCCTCGCTCTCGATCTCCGAGATGGCGCGCAGCCTGCGCCATCCCGAGCGTTTCGCTGGCCTTCACTTTTTCAACCCGGTGCCCGCGATGAAGCTCGTCGAGGTGGTCGCGGGGGCAGAGACCAACCCTGTGGTTGTCGAGCAGCTGACCCGCCTCATGGCCGCGTGGGGCAAGCACGCGGTCGCGGTGAAGGATGTGCCCGGCTTCATCGTCAATCGCGTGGCGCGGCCCTTCTATGCCGAGGCCTTCCTGGCACTCGACGAAGGAATTCCAGCCGCGCTGATCGACGACGCGATCAGCAGCGGGGGCGGGTTCCGGATGGGGCCGCTCACGCTCGCGGATATGATCGGCCACGATGTGAACTATGCGGCCGCCCGCTCGGTCTTCGATGGGATTTCCCCGCACGCGCGGTTTCGGCCCCAGCCGGCGCAGGCGCGGCTGCTGGACGAAGGGCGACTAGGCCGCAAGTCGGGCAGGGGGGTCTATGACTATGGAGCCGCCGAGAAAACCGGGCAGGTCGATCAAACGACCGCCAGCCAGCGGCCAGCGCCTCAAATCGCCGTCGCCCAGGACGCGCAGGACTTTCTCTGGCTGAGCGGGAGGCTGTCGACCTCGCCTGCGACAGGAATACCTGCCGGCAGCATTTCGGTTGATGGCGTCATCGTGGCGAAGGGAGACGGCCGCACGCTCGATCAGCGGCGCGAAGTGGACGTCCTCCTCGACCATGTTCATGACCACGCCATATCGCCGGTGCTGATCGCATCGGCGCGCGACGAGCGTTCGGCTGCGGCCGCCGCGGATCTCGCCTTCGCGCTCGATAAGAGGCTTCTTCTCCTTCCCGACCGGCCGGGCCAGATCGTCCTGCGGACCCTGGCGCAGCTCGTCAATGGCGCGGCGGATGCCGTCGAGGATGGCATCGCGCCGGCCAACGCCATCGACGAGGCGATGATCCACGGTGCCAATTATCCGCGCGGGCCATTGGCCTGGGCCCGCGATTTCGGGCCTGCCAGGCTGAAGCAGACACTCCTCCATATCGCTGCCGGCACGGACGATCTTCTTTATTCCCCGTCGCGCGGGCTCGACCGCCTGTGA
PROTEIN sequence
Length: 481
MNRKVAVIGAGTMGSGIGQVAATAGHEVVVIDRDASALDRGRQLLAKSIGALVARSRLDRDDADTIVARIGWSQELGDAADAGLIIEAVLEDLDVKHRLFADLGALAARDAIVASNTSSLSISEMARSLRHPERFAGLHFFNPVPAMKLVEVVAGAETNPVVVEQLTRLMAAWGKHAVAVKDVPGFIVNRVARPFYAEAFLALDEGIPAALIDDAISSGGGFRMGPLTLADMIGHDVNYAAARSVFDGISPHARFRPQPAQARLLDEGRLGRKSGRGVYDYGAAEKTGQVDQTTASQRPAPQIAVAQDAQDFLWLSGRLSTSPATGIPAGSISVDGVIVAKGDGRTLDQRREVDVLLDHVHDHAISPVLIASARDERSAAAAADLAFALDKRLLLLPDRPGQIVLRTLAQLVNGAADAVEDGIAPANAIDEAMIHGANYPRGPLAWARDFGPARLKQTLLHIAAGTDDLLYSPSRGLDRL*