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SCNpilot_expt_500_bf_scaffold_3609_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 604..1293

Top 3 Functional Annotations

Value Algorithm Source
Two-component response transcriptional regulator (OmpR family) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8ARE8_AZOBR similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 226.0
  • Bit_score: 236
  • Evalue 2.40e-59
Chemotaxis protein CheY {ECO:0000313|EMBL:AIL13200.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 229.0
  • Bit_score: 420
  • Evalue 1.30e-114
two-component response transcriptional regulator (OmpR family) similarity KEGG
DB: KEGG
  • Identity: 54.4
  • Coverage: 226.0
  • Bit_score: 236
  • Evalue 7.60e-60

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGTTGCAACTTCTCATTTGCTTGTTATTGATGATGACCGTCGCCTCCGAGAGCTTTTACAAAAATATCTTGAGGAAAATGGTTATCAAGTCTTAGTAGCTGCTTCTGCCCAAGAAGCGCGACAAAAATTAGCCCAAGAAGCTCATCTTATTATCCTCGACCTTATGATGCCAGAAGAATCAGGCCTTGAATTTTTAAAATGGCTTCGACATGACAAGAAAAATGACATTCCTGTTTTGATGTTGACTGCCATGGGAGAAGTAGATCATCGTATTGAAGGCTTAGAAGCTGGGGCAGATGATTATCTTGCAAAGCCTTTTGAACCTCGCGAACTTCTTTTGAGAATTCGTAATCTTCTTCAAAGAAAATCTAAATTAACCTATCCTGCTTCTGCTATACGTCTAGGCATGCTTACCTATGATCCGACTCGAGCCACTCTCAAATGCGGTGACAAATCAATCCATCTAACTTCTCTGGAAGTTACTTTAATGAATATTTTCTCTCAACAGCCAGGAGTCCCTATTAGTCGTGAGAAGCTAGCTGAATTAAGTGGGGTCAGTTTAAGCCCAAGAACCGTAGATGTCCAAATTACAAGGCTCCGTAAAAAAATTGAAAAAGATCCTAAGCAACCTCTTTACCTTCATACAGTGAGGCATCAAGGATATGTCTTGAGGCCTGATATAATATGA
PROTEIN sequence
Length: 230
MVATSHLLVIDDDRRLRELLQKYLEENGYQVLVAASAQEARQKLAQEAHLIILDLMMPEESGLEFLKWLRHDKKNDIPVLMLTAMGEVDHRIEGLEAGADDYLAKPFEPRELLLRIRNLLQRKSKLTYPASAIRLGMLTYDPTRATLKCGDKSIHLTSLEVTLMNIFSQQPGVPISREKLAELSGVSLSPRTVDVQITRLRKKIEKDPKQPLYLHTVRHQGYVLRPDII*