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SCNpilot_expt_500_bf_scaffold_3609_8

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(6337..7263)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, LysR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z3D7_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 28.5
  • Coverage: 288.0
  • Bit_score: 132
  • Evalue 8.60e-28
putative transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 28.5
  • Coverage: 288.0
  • Bit_score: 132
  • Evalue 2.70e-28
Putative transcriptional regulator, LysR family {ECO:0000313|EMBL:CBS87937.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum lipoferum (strain 4B).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.5
  • Coverage: 288.0
  • Bit_score: 132
  • Evalue 1.20e-27

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Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGTCAACAGGTTGTTTAATTTTTTTTACAGATGAATTTGTTATGGATATTAATCGTTTAAAAGCATTCTGCCTTCTTTATGAATCTGGTGGATTTCAAGAAGCGAGTCGAAGGTCAAAGTCAAATCCTACGAGTATTCGCAGTAAAGTTGTTCTCTTAGAAAAAGAGCTTGGAACAAAGCTCATTGAAACTTCTGGACAAAGAGTTGTTTTTACAGCAGCTGGGCATCGCTTTCATAAGGAGGCTTTGCAGATTATTGATTTTTCAACAGCGCGACTTGATAATTTTAAAGCAGAACAAGAAGGATTTTATGATAAAATTATCATTGCGACAACTCATGCAATCGCTTCTTTATGGCTTCCTGCTGTCTTGCCTAAATTCAGAGCATCATTTCCAAAAACGGCTATTATCGTTAAATCATCAGATGAGCAATTTAATCTTTATCAACGTGAAGCGGATGTCTCAATCGCAGCTTTTGATGATTCTAGACCTCAAGAAGACGACTTGAGGCACCTTCTTTTAACAAATTATTATATGAATCTTTATGCAAGTGAAGAATATCTTAACCAGTATGGAGTTCCTGCAACAATTCAAGATTTACAACATCATACAATGATTAGTTTTGGTAAAGATATTCCTTATCCTTATCCTTCGATTAACTGGCATCTTGAATTTCTTCCTTCAACTTTTGTCTCCCTTATTCAAGTAAACTCAGGAGCTGCCATATTAAAAACTGTTCAAAATGACCTTGGTATTGGCTCAATATCTCAAAAAGGAGCAGAGACGAGTGAAAAGAAACTAGTGAGAATCCTTCCTAATCTTCTCACCGGCCCAACTTTGAACATCACATATAACTTTCCCAAAACAAGAGCTGAAGAGCCTCTTATTAAGAAGCTATACGAAATTCTGAAGTCTTCTTTTGAGTGA
PROTEIN sequence
Length: 309
MSTGCLIFFTDEFVMDINRLKAFCLLYESGGFQEASRRSKSNPTSIRSKVVLLEKELGTKLIETSGQRVVFTAAGHRFHKEALQIIDFSTARLDNFKAEQEGFYDKIIIATTHAIASLWLPAVLPKFRASFPKTAIIVKSSDEQFNLYQREADVSIAAFDDSRPQEDDLRHLLLTNYYMNLYASEEYLNQYGVPATIQDLQHHTMISFGKDIPYPYPSINWHLEFLPSTFVSLIQVNSGAAILKTVQNDLGIGSISQKGAETSEKKLVRILPNLLTGPTLNITYNFPKTRAEEPLIKKLYEILKSSFE*