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SCNpilot_expt_500_bf_scaffold_3609_9

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: 8262..8627

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00094401};; RNA polymerase omega subunit {ECO:0000256|HAMAP-Rule:MF_00366}; Transcriptase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acantham similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 123.0
  • Bit_score: 222
  • Evalue 4.60e-55
rpoZ; DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 126.0
  • Bit_score: 119
  • Evalue 7.20e-25
DNA-directed RNA polymerase subunit omega n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FRD2_PHAMO similarity UNIREF
DB: UNIREF100
  • Identity: 56.3
  • Coverage: 119.0
  • Bit_score: 120
  • Evalue 1.00e-24

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGGCACGCGTTACTGTTGAAGATTGTGTTCGCAAAGTATCAAATCGCTTTGAACTCGTTTTGGTTGCTTCGCAACGTGCCCGTCAGATTGGAGCAGGTTCTCTACTAACTGTTGATAGAGATAATGATAAAAATCCTGTTGTTGCGCTAAGAGAAATTGCTGTTGGCACAGTTGAGGCTGATACGCTTAAGGATGGTTTAATTAATTCTTTCCGTATCCAAGTTGAAAGCGATCCTCAAGAAGATGAGATTTCTGATTTTGTTGCCCAAGAAACATTACGTTTTCAACAACCTACCTCTTCTTTTGACGATGAATCTGATGATGAAGATTTAGAAGAAGAAAAAGACGAAACTACTTCCCTTTAG
PROTEIN sequence
Length: 122
MARVTVEDCVRKVSNRFELVLVASQRARQIGAGSLLTVDRDNDKNPVVALREIAVGTVEADTLKDGLINSFRIQVESDPQEDEISDFVAQETLRFQQPTSSFDDESDDEDLEEEKDETTSL*