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SCNpilot_expt_500_bf_scaffold_4246_7

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(4526..4972)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FXS8_PHAMO similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 124.0
  • Bit_score: 196
  • Evalue 2.30e-47
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.8
  • Coverage: 131.0
  • Bit_score: 212
  • Evalue 5.80e-52
single-stranded DNA-binding protein; K03111 single-strand DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 73.2
  • Coverage: 123.0
  • Bit_score: 195
  • Evalue 1.30e-47

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 447
ATGTCAAGCTCAGTAAACAAAGTGATATTGGTTGGTAACTTAGGAAAAGAGCCAGAAATTCGTATGGCTCAAGATGGGACAAAGATAGCTCAATTATCTATTGCCACATCCGATTCTTGGAAAGATAAGCTGACAGGGGAACGCAAAGAAAAAACGGAATGGCACAGAGTTGTTGTGTTCAATCCTAATATTGCTGATGTATGTGAGAAATATCTCCGCAAAGGAGCTAAGGTCTATCTAGAAGGACAGCTACAAACTCGTAAATGGACAGATCAGGCAGGACAAGAGAAATATACCACTGAAGTTGTATTGCCTAAGTTCAAGGGTGAACTAACAATGTTAGATGGTCGCTCAGAAGGTGAGGGGAGCACACCAACTATGGACTACATGAGTAATATAACACCCGATAATTCTTCTTCAAATGATGTAAGCGATCTACCGTTTTAA
PROTEIN sequence
Length: 149
MSSSVNKVILVGNLGKEPEIRMAQDGTKIAQLSIATSDSWKDKLTGERKEKTEWHRVVVFNPNIADVCEKYLRKGAKVYLEGQLQTRKWTDQAGQEKYTTEVVLPKFKGELTMLDGRSEGEGSTPTMDYMSNITPDNSSSNDVSDLPF*