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SCNpilot_expt_500_bf_scaffold_10190_7

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(4076..5860)

Top 3 Functional Annotations

Value Algorithm Source
recJ; single-stranded-DNA-specific exonuclease recJ; K07462 single-stranded-DNA-specific exonuclease [EC:3.1.-.-] similarity KEGG
DB: KEGG
  • Identity: 51.1
  • Coverage: 591.0
  • Bit_score: 603
  • Evalue 6.10e-170
  • rbh
Single-stranded-DNA-specific exonuclease recJ n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2LCT2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 52.9
  • Coverage: 578.0
  • Bit_score: 604
  • Evalue 1.10e-169
  • rbh
Single-stranded DNA exonuclease {ECO:0000313|EMBL:KJE35283.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 578.0
  • Bit_score: 614
  • Evalue 1.50e-172

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Taxonomy

Thalassospira sp. HJ → Thalassospira → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1785
ATGCTTGATTTTTCATGCTCTACATCAATTACAGGAAAGCGCTGGCAAGAAAAGGCGTGCGATGACCGCCTTGCATTTGCCCTTTCCCAACGCTTAGACGAACCTGAAATTGTAGGGCGACTTCTTGCAAGTCGAAACATCACACTTGAAGAAGCTCCTGATTTTTTAACTCCCTCTTTAAAAAACTTACTCGTTGACCCCTCTCACCTTCATGATTTAAACAATGCCGTCCAAAGGATCATTCAGGCAATTGAAAAAAAAGAAAAGATCTGCATTTTTGGCGATTATGATGTAGATGGAGCAACGTCAACAGCCCTCCTATACCGCTATTTTAAACAAATTGATCTTCATGTAGATTTCTATATTCCCGATCGTCTTCAAGAAGGTTATGGCCCCAATATACTTGCCATAGAAAAACTTCGGCAATCCGGTGTACACTTGATCATCACTGTCGATTGCGGAACAACTTCTCACGCCCCCCTCAAAGCAGCTGAAAACATGGGGCTTGATGTCATCGTCATCGATCATCATATCGGAGAGCCAAAATTACCACCAGCGACTGCAATTGTGAACCCTAACCGCTTAGATCAAGAAAGTTCATGTCAAACATTAGCTGCCGTTGGTGTCAGTTTTTTGTTACTCATTGCGCTTAATCGAACCCTACGTCAACAAGGCTATTTCAAATCTTTCCCTGAACCCAACCTTCTACAATTTCTTGATTTAGTCGCCTTAGGAACAGTGTGTGATGTCATGCCGTTGCAAAAGCTTAATCGTGCTTTTGTTACCCAAGGATTAAAAGTGATGGCTCAACGACAAAATTTGGGCCTTAAAACATTGATGGATACAGCCGGCTTACAAGAAGCTCCTTCAGCTTATCACTTAGGCTTTATGTTAGGACCTCGCATCAATGCTGGAGGTCGCGTCGGAAAATCGACTCATGGTGTTACCCTTTTAACCACGGATGACCCAGCTCTAGCTCAAAAAATTGCGCAAGAACTTGAAGTTTTTAACCGTGAACGCCAAGCCATTGAGGCAGAAGTTCTTAAAGAAGCGCGGTTTCAAGCAGAAATTGAAGCCAACCAAAACTCTATTTTAATTGTTGGAAGTGCACAATGGCACCCCGGAGTTATCGGGATTGTCGCAGGCCGACTCAAAGATCATTACCATCGCCCAACATTGGTTATTAGTTTTGATGAGAATGATATTGGAAAAGGTTCGGGTCGTTCCATTCCTGGCATTGATCTAGGATCCCTTATCCAAGCCGCACGCCAAAGGAATCTTATTCTCGCCGGAGGGGGGCACTACATGGCAGCAGGATTTACAATTGAGAAATCAAAACTTGAGCCTTTTAAAAGCTTTTTAAATGAACGTATTCAAGCGTTTAAGATTGATATGACTCCCTATTTAACAATTGACGGCTATCTCTCACTTGACTCAGCCACGCCTGAATTATTGCACAAATTGGAACGGTTAGCCCCTTATGGACAAGGCAATCCTACCCCACGATTTGTGTTTTCAAATATCCGCATTCTTCATGCTGAAATCGTTGGCAACAGCCACATCAAATGTCACTTAGGGACCTTAGAAGGAAGTCGACTGCAAGCTATTGCTTTTAAAAGCTATGAAACAACTTTAGGCCCTGCCCTCTTAAACCATTCGGGGCGCTTTTTCCACATACTCGGGACCTTAAAACTTGATTCTTGGCTAGGTCAGAATCGTGTCCAACTTTCAATTGAAGACGCCTTTTTCGCATCCGAGGCATCCCGTCAAGCAAACTTACTATGA
PROTEIN sequence
Length: 595
MLDFSCSTSITGKRWQEKACDDRLAFALSQRLDEPEIVGRLLASRNITLEEAPDFLTPSLKNLLVDPSHLHDLNNAVQRIIQAIEKKEKICIFGDYDVDGATSTALLYRYFKQIDLHVDFYIPDRLQEGYGPNILAIEKLRQSGVHLIITVDCGTTSHAPLKAAENMGLDVIVIDHHIGEPKLPPATAIVNPNRLDQESSCQTLAAVGVSFLLLIALNRTLRQQGYFKSFPEPNLLQFLDLVALGTVCDVMPLQKLNRAFVTQGLKVMAQRQNLGLKTLMDTAGLQEAPSAYHLGFMLGPRINAGGRVGKSTHGVTLLTTDDPALAQKIAQELEVFNRERQAIEAEVLKEARFQAEIEANQNSILIVGSAQWHPGVIGIVAGRLKDHYHRPTLVISFDENDIGKGSGRSIPGIDLGSLIQAARQRNLILAGGGHYMAAGFTIEKSKLEPFKSFLNERIQAFKIDMTPYLTIDGYLSLDSATPELLHKLERLAPYGQGNPTPRFVFSNIRILHAEIVGNSHIKCHLGTLEGSRLQAIAFKSYETTLGPALLNHSGRFFHILGTLKLDSWLGQNRVQLSIEDAFFASEASRQANLL*