ggKbase home page

SCNpilot_expt_500_bf_scaffold_9539_1

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(3..317)

Top 3 Functional Annotations

Value Algorithm Source
peptide chain release factor 1 n=1 Tax=Candidatus Odyssella thessalonicensis RepID=UPI000225B1B9 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 105.0
  • Bit_score: 103
  • Evalue 1.50e-19
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 105.0
  • Bit_score: 203
  • Evalue 1.50e-49
similar to peptide chain release factor, putative similarity KEGG
DB: KEGG
  • Identity: 52.4
  • Coverage: 105.0
  • Bit_score: 111
  • Evalue 1.70e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
GTGAGTTTTGATAATAAGCTAAATCAGGTCCTTGCACGTTATCACGAGCTTGGAGATATGCTTGGTACGGGAAATCATGAAAGTGGACAAGAGTTTGTTCGCCTTTCGAAAGAGTATTCAGACCTTAAAGATGTGGCTGAAGCTATTACATTATTACGTAAAGAGCAAAGTGAGATCAAAAATTTAGAAGAATTACTTCAGGATTCTACTCTTGATGCAGAATTTAAAGTACTTGCAGAAGAAGATTTAAGAGCTCGAAAGGAACAAATTCCTAACCTTGAGCATCAAATGAAAGTTCTTTTGTTGCCCAAAGAT
PROTEIN sequence
Length: 105
VSFDNKLNQVLARYHELGDMLGTGNHESGQEFVRLSKEYSDLKDVAEAITLLRKEQSEIKNLEELLQDSTLDAEFKVLAEEDLRARKEQIPNLEHQMKVLLLPKD