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SCNpilot_expt_500_bf_scaffold_17131_2

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(1080..1517)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L17 n=1 Tax=Thalassospira profundimaris WP0211 RepID=K2M283_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 142.0
  • Bit_score: 174
  • Evalue 9.40e-41
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 145.0
  • Bit_score: 265
  • Evalue 3.30e-68
rplQ; 50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 141.0
  • Bit_score: 168
  • Evalue 1.20e-39

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Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 438
ATGCGCCATCGTTTGCGTGGACGTCAATTAAATCGTACAACTAATCAACGTAAAGCTTTATTACGTGGACTTGCTAAAGATTTAATTCGTCATGAACAAATTACGACAACATTACCTAAGGCCAAAGATTTAAGGCCGTTTGTAGAAAAACTCGTCACTTTAGGTCGACGTGGTGGGCTTCACGTTTATCGCCAAGCGCTTTCAGTTCTTGGGGATAATGAGTTAGCACGTAAGCTAACAGGAACACTTGCGGATCGTTACCGTAATAGAGCTGGCGGATATACTCGCATTATTAAAGCAGGATTCCGTTATGGTGATAATGCACCTTTAGCTGTTATTGAATTTATTGAACGTGACGTTGCTGCTAAAGGCGCAGGCCAGAAGATTGAAGCGACAGCAGCGGTATCAGATGCTGCAGCTCCTGAGGCCCAAGCCTAG
PROTEIN sequence
Length: 146
MRHRLRGRQLNRTTNQRKALLRGLAKDLIRHEQITTTLPKAKDLRPFVEKLVTLGRRGGLHVYRQALSVLGDNELARKLTGTLADRYRNRAGGYTRIIKAGFRYGDNAPLAVIEFIERDVAAKGAGQKIEATAAVSDAAAPEAQA*