ggKbase home page

SCNpilot_expt_500_bf_scaffold_19370_4

Organism: SCNPILOT_EXPT_750_P_Alphaproteobacteria_novel_39_47

near complete RP 46 / 55 MC: 1 BSCG 47 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(2831..3151)

Top 3 Functional Annotations

Value Algorithm Source
excinuclease ABC subunit A n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F085 similarity UNIREF
DB: UNIREF100
  • Identity: 79.2
  • Coverage: 106.0
  • Bit_score: 180
  • Evalue 7.30e-43
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.2
  • Coverage: 106.0
  • Bit_score: 208
  • Evalue 3.50e-51
uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 106.0
  • Bit_score: 180
  • Evalue 2.30e-43

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Caedibacter acanthamoebae → Caedibacter → Rickettsiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 321
GCGCAACGTATTAAACTTTCTAAGGAACTTTCTAAGCGAGCCACGGGCCGCACGCTTTATATTCTTGATGAACCGACGACGGGGCTTCATTTTGAGGATGTGAATAAGCTTTTGGAAGTTCTTCATTCTCTCGTAGATCAAGGCAATACAATCATTGTGATTGAGCATAACCTTGAAGTCATAAAAACAGCCGATTGGGTGATTGATTTAGGTCCAGAAGGGGGCCATGAAGGCGGGCGTATCGTGGGAACCGGGATACCTGAAGCGCTTGCAAAGATTCCTGAAAGCTACACAGGAAAGTACCTTACAAAATATCTGTAA
PROTEIN sequence
Length: 107
AQRIKLSKELSKRATGRTLYILDEPTTGLHFEDVNKLLEVLHSLVDQGNTIIVIEHNLEVIKTADWVIDLGPEGGHEGGRIVGTGIPEALAKIPESYTGKYLTKYL*