ggKbase home page

SCNpilot_expt_500_bf_scaffold_487_20

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 21185..21934

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6EY06_SPHCR similarity UNIREF
DB: UNIREF100
  • Identity: 48.0
  • Coverage: 221.0
  • Bit_score: 212
  • Evalue 4.10e-52
TetR family transcriptional regulator {ECO:0000313|EMBL:AJR25180.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 48.0
  • Coverage: 221.0
  • Bit_score: 216
  • Evalue 5.20e-53
regulatory protein TetR similarity KEGG
DB: KEGG
  • Identity: 48.0
  • Coverage: 221.0
  • Bit_score: 212
  • Evalue 1.30e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGCTGGACCAGGACGACACCGCAGGCCCCGAAGGACAGGAAGCCGCTGCCGGCAATGCGCGGTCCGCCGGCTATTCCAGCCCCTCGATCGTCGCCCGCCGCCACCGCATCCTGGACGAGACACGCCGGATGATCGGCGAGGTCGGCCTGACCAATCTCAGCATGGACGACGTGGCGAAGCGCGCGAACGTCGCCAAGCGCACGCTCTACAATGCGTTCCAGAGCAAGGAGCACCTCGTCGCCTCCGCGATCAGCAAATATATGGAGGCTTACGAGCGCAAGATCCATTATTCCAAAGAGGATGCGACGCTCGACTGGATGCTCGAGCGCCTCGTCATCGTCGCGCGCCGCAACCTGGAAATCCGCAACTACACCCGCGCGCTGATGAACATCTATCATCTCGCCGAGGTGGACCCGGAAATCCGCCAGGCGATCCACGACATCGCCGCCCATTCGCATGAGCCGTGGATACGCCGGCTGGCGGCGAAGCGGCAGCTCCAGCCGTGGGTCGACCCCGACGATCTCACCTCGATGCTGGTGCGCTACCGCTACGCCACCGCCCACGCCTGGACCGAGGGCGAGATTCCCGACGAGAACATGGTGGTGGAGGTGGTGCGCGGCTTCCTGACGGTGATGGCGGGCGCGACGCGCGGGGCTGCGCGCAAGGAAATCGTCGACGCGCTCAATACGCTCGATCAGCATCCGCTCCTGAAGGAGCATTTCGCCGGGATGAGGAAGAAGAAGGGCTGA
PROTEIN sequence
Length: 250
MLDQDDTAGPEGQEAAAGNARSAGYSSPSIVARRHRILDETRRMIGEVGLTNLSMDDVAKRANVAKRTLYNAFQSKEHLVASAISKYMEAYERKIHYSKEDATLDWMLERLVIVARRNLEIRNYTRALMNIYHLAEVDPEIRQAIHDIAAHSHEPWIRRLAAKRQLQPWVDPDDLTSMLVRYRYATAHAWTEGEIPDENMVVEVVRGFLTVMAGATRGAARKEIVDALNTLDQHPLLKEHFAGMRKKKG*