ggKbase home page

SCNpilot_expt_500_bf_scaffold_1371_6

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: 5992..6528

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A56C37 similarity UNIREF
DB: UNIREF100
  • Identity: 82.6
  • Coverage: 172.0
  • Bit_score: 287
  • Evalue 9.30e-75
Histidine kinase {ECO:0000313|EMBL:AJR23769.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 172.0
  • Bit_score: 288
  • Evalue 5.90e-75
GAF sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 172.0
  • Bit_score: 286
  • Evalue 6.50e-75

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingobium sp. YBL2 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGGACAGGAAATCGGCGAGCGAGCGCGAATCCCGGCAGAAGGCGCTGGCGGCCCGCTGGAGCATGGCGGCGGAGGCGATAGAGGCCCTGGCCGGCACGCGATCGCTCGACGCCGTGGTCAGCGTGTTGCGCGCCTTCGCGCGGCGCGCGGTCGGAGCGGACGGCATCGCGGTCGTCCTTCGCGAGGGCGATCAGTGCCATTATGTCGCGGAGGATGCGATGGAGCCGCTCTGGGCCGGGCAATATTTCCCGGCCGGGAGCTGCGTCTCCGGCTGGGCGATGCAGCATCATCAGACGGCGGTGATCCCCGATATCTTCGATGATCCGCGCGTTCCGGTCGAGGCATATCGCGCCACGTTCGTCCGCTCGATGCTGATGGTGCCGATCGGCCGGATCGAAGCCATTGCGGCGGTCGGCGCCTATTGGTCCGAGTTCGGGCAGCCCTCCGACGACGAGATCATGCTGCTTGAGGCGTTGGCGCGCGCCGCTTCGGTCGCGCTGGAGAATGAACGCCTTTCGCGGCGCGCGGGCGGGTGA
PROTEIN sequence
Length: 179
MDRKSASERESRQKALAARWSMAAEAIEALAGTRSLDAVVSVLRAFARRAVGADGIAVVLREGDQCHYVAEDAMEPLWAGQYFPAGSCVSGWAMQHHQTAVIPDIFDDPRVPVEAYRATFVRSMLMVPIGRIEAIAAVGAYWSEFGQPSDDEIMLLEALARAASVALENERLSRRAGG*