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SCNpilot_expt_500_bf_scaffold_6591_9

Organism: SCNPILOT_CONT_300_BF_Sphingomonadales_67_36

partial RP 33 / 55 BSCG 33 / 51 MC: 2 ASCG 11 / 38 MC: 1
Location: comp(6896..7573)

Top 3 Functional Annotations

Value Algorithm Source
Fis family transcriptional regulator n=1 Tax=Sphingomonas melonis RepID=UPI00036FB985 similarity UNIREF
DB: UNIREF100
  • Identity: 80.0
  • Coverage: 200.0
  • Bit_score: 313
  • Evalue 2.00e-82
Response regulator {ECO:0000313|EMBL:EZP50927.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.5
  • Coverage: 200.0
  • Bit_score: 316
  • Evalue 4.30e-83
Fis family two component sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.5
  • Coverage: 200.0
  • Bit_score: 263
  • Evalue 5.70e-68

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Taxonomy

Sphingomonas sp. RIT328 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 678
TCTGCCGAATCCGTCCCTGCCGTATCGGAATGGAACGAAAGAATGACGCGTAACGGGCAACGGCTGCTGATGCTGATCGACGACGAACCGGGCCAGCGCCGGCTGGTCGCGGCGCTCGCGGCGCGCGGCGGCTGGCGCACCCTGTTCGCCGACGACGCGGAAATGGCGATCGCCACGCTCGGCACGCAGGACGGGATGCGGCTCGACGCGATCGTGCTCGATCATCACGGCGAGGACGACGCCACGGCCGTGCTGCTCGGCGAGTTGCGCGCGCGCCGCCCGGCGTTGCCGGTGCTGGTGACGGCGGCCAACGGCTCGGTCGCGCACGCGGTCAACGCGATGCGGGCGGGGGCGACCGATTTCCTGGTCCGGCCGATCGCGCCCGAACGGCTGCTCGCGGCGCTCGAGGCCGCCGTCGCCGGCACCGAGGCGGGCGAGCTGCGCCCGCTGACCGAGAAGATCCCCGCGATGCTGGGCTTCGACGAGATCGTCGGCTCCGCGCCGGATTTCCGCGCCGCGCTGGCGATCGCGGCCAAGGCGGCGCGCGCGCGCGTCGCGGTATTGATCGAGGGCGAGGGCGGCGTCGGCAAGGAAGTGGTGGCGGAGGCGATCCACGCCGCGTCGCCGCGCGGTCGCAAGCCCCGCCAATCTCGTCGAAAGCGAGCTGTTCGGGCATGA
PROTEIN sequence
Length: 226
SAESVPAVSEWNERMTRNGQRLLMLIDDEPGQRRLVAALAARGGWRTLFADDAEMAIATLGTQDGMRLDAIVLDHHGEDDATAVLLGELRARRPALPVLVTAANGSVAHAVNAMRAGATDFLVRPIAPERLLAALEAAVAGTEAGELRPLTEKIPAMLGFDEIVGSAPDFRAALAIAAKAARARVAVLIEGEGGVGKEVVAEAIHAASPRGRKPRQSRRKRAVRA*